RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 VPS72Q15906 364 aa6.83□□□□□ -1.32
PTPRK-210ENST00000415055 NEUROD4Q9HD90 331 aa6.83□□□□□ -1.32
PTPRK-210ENST00000415055 GPC6Q9Y625 555 aaPredicted RBP6.83□□□□□ -1.32
PTPRK-210ENST00000415055 NWD2Q9ULI1 1742 aa6.83□□□□□ -1.32
PTPRK-210ENST00000415055 PXDNQ92626 1479 aa6.83□□□□□ -1.32
PTPRK-210ENST00000415055 NUP155O75694 1391 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ROBO2Q9HCK4 1378 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 SLIT2O94813 1529 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ELOA3CA0A087WX78 387 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-210ENST00000415055 USP17L3A6NCW0 530 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 USP17L4A6NCW7 530 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ELOA3DA6NLF2 546 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-210ENST00000415055 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ELOA3BQ3SY89 546 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 LRRC69Q6ZNQ3 347 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 USP17L1Q7RTZ2 530 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 SYT9Q86SS6 491 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 SLC9A9Q8IVB4 645 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ELOA3Q8NG57 546 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 TRIM11Q96F44 468 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 PLVAPQ9BX97 442 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 RGPD8O14715 1765 aaPredicted RBP6.82□□□□□ -1.32
PTPRK-210ENST00000415055 CHD4Q14839 1912 aa6.82□□□□□ -1.32
PTPRK-210ENST00000415055 SERTM1A2A2V5 107 aa6.81□□□□□ -1.32
PTPRK-210ENST00000415055 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
PTPRK-210ENST00000415055 ELOAQ14241 798 aaKnown RBP6.81□□□□□ -1.32
PTPRK-210ENST00000415055 EZH2Q15910 746 aaKnown RBP6.81□□□□□ -1.32
PTPRK-210ENST00000415055 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
PTPRK-210ENST00000415055 TNS4Q8IZW8 715 aa6.81□□□□□ -1.32
PTPRK-210ENST00000415055 TNS1Q9HBL0 1735 aaKnown RBP6.81□□□□□ -1.32
PTPRK-210ENST00000415055 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
PTPRK-210ENST00000415055 SPDYE3A6NKU9 549 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 SIN3BO75182 1162 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 ITGAEP38570 1179 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 KRT28Q7Z3Y7 464 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 MDFIQ99750 246 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 CAMTA1Q9Y6Y1 1673 aa6.8□□□□□ -1.32
PTPRK-210ENST00000415055 SPATA31A3Q5VYP0 1347 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 CDC42BPGQ6DT37 1551 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 LOC105371045A0A1W2PR82 267 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 CARNS1A5YM72 827 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 ADARB2-AS1A8MUL3 147 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 TRIM37O94972 964 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 Q8N3U1 123 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 RHPN1Q8TCX5 695 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 C7orf43Q8WVR3 580 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 STK26Q9P289 416 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 CLTCL1P53675 1640 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 ABCA3Q99758 1704 aa6.79□□□□□ -1.32
PTPRK-210ENST00000415055 ADGRB2O60241 1585 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 KIF1AQ12756 1690 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 CCDC144AA2RUR9 1427 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 NAIPQ13075 1403 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 APBA3O96018 575 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 GATA4P43694 442 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
PTPRK-210ENST00000415055 DOC2BQ14184 412 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 NBPF8Q3BBV2 869 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 PLEKHM2Q8IWE5 1019 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 TPCN2Q8NHX9 752 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 BTG4Q9NY30 223 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 CHMP3Q9Y3E7 222 aa6.78□□□□□ -1.32
PTPRK-210ENST00000415055 CEP350Q5VT06 3117 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 KAT6BQ8WYB5 2073 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 NRAPQ86VF7 1730 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 ZBTB7BO15156 539 aaPredicted RBP6.77□□□□□ -1.33
PTPRK-210ENST00000415055 PSMA6P60900 246 aaKnown RBP6.77□□□□□ -1.33
PTPRK-210ENST00000415055 PRRT3Q5FWE3 981 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 SH3PXD2AQ5TCZ1 1133 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 C1orf53Q5VUE5 145 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 CCDC102BQ68D86 513 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 WAPLQ7Z5K2 1190 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 TNFRSF25Q93038 417 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 SLC30A3Q99726 388 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 MKRN1Q9UHC7 482 aaKnown RBP6.77□□□□□ -1.33
PTPRK-210ENST00000415055 KIAA1024Q9UPX6 916 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
PTPRK-210ENST00000415055 GNEQ9Y223 722 aaKnown RBP6.77□□□□□ -1.33
PTPRK-210ENST00000415055 TNS3Q68CZ2 1445 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 NUP188Q5SRE5 1749 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 FMN2Q9NZ56 1722 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 UTRNP46939 3433 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 M0R082 166 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 HIRAP54198 1017 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-210ENST00000415055 SPEM2Q0P670 501 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 CAMKK2Q96RR4 588 aa6.76□□□□□ -1.33
PTPRK-210ENST00000415055 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-210ENST00000415055 TSPAN10Q9H1Z9 355 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms