RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 IBSPP21815 317 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 EIF4BP23588 611 aaKnown RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 ETFBP38117 255 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 TBX4P57082 545 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 TRIM32Q13049 653 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PPP2R5EQ16537 467 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PLEKHG4Q58EX7 1191 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PPP1R26Q5T8A7 1209 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 BICDL1Q6ZP65 573 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 VPS37DQ86XT2 251 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 ZNF512BQ96KM6 892 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 C2orf49Q9BVC5 232 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 SCHIP1Q9P0W5 487 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 KIF1AQ12756 1690 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 NRXN3Q9Y4C0 1643 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 BHMG1C9JSJ3 638 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 FGAP02671 866 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PDGFAP04085 211 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PLA2G4AP47712 749 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 MMP16P51512 607 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 LSM11P83369 360 aaKnown RBP eCLIP3.48□□□□□ -1.85
MCF2-204ENST00000414978 FGD1P98174 961 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 ARSJQ5FYB0 599 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 ALKBH8Q96BT7 664 aaKnown RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 ENAMQ9NRM1 1142 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PFDN2Q9UHV9 154 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 PPT2Q9UMR5 302 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 CRYBG1Q9Y4K1 1723 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 FOXO3O43524 673 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 ADH1BP00325 375 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 HSD3B2P26439 372 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 GBP2P32456 591 aaPredicted RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 PSMA6P60900 246 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 PLA2G2CQ5R387 149 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 UBR7Q8N806 425 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 ZNF280CQ8ND82 737 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 DMRTB1Q96MA1 342 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 SPON2Q9BUD6 331 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 METTL14Q9HCE5 456 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 LATS2Q9NRM7 1088 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 UBP1Q9NZI7 540 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 SPG7Q9UQ90 795 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 R3HCC1Q9Y3T6 440 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 SERTM1A2A2V5 107 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 ST18O60284 1047 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 RASA3Q14644 834 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 CCDC85BQ15834 202 aaPredicted RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 ENOX2Q16206 610 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 CCDC181Q5TID7 509 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 WDR75Q8IWA0 830 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 GPKOWQ92917 476 aaPredicted RBP eCLIP3.47□□□□□ -1.85
MCF2-204ENST00000414978 FAM86C1Q9NVL1 165 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 NOP58Q9Y2X3 529 aaKnown RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 DUOX2Q9NRD8 1548 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 ZFYVE9O95405 1425 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 POTEB3A0JP26 581 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 FAM221BA6H8Z2 402 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 SNPHO15079 494 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 RXRBP28702 533 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 CCDC184Q52MB2 194 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 POTEBQ6S5H4 581 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 APBB1IPQ7Z5R6 666 aaPredicted RBP3.47□□□□□ -1.85
MCF2-204ENST00000414978 LAPTM4BQ86VI4 370 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 CKAP2LQ8IYA6 745 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 HS3ST6Q96QI5 342 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 IFT57Q9NWB7 429 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 KNDC1Q76NI1 1749 aa3.47□□□□□ -1.85
MCF2-204ENST00000414978 FAM83GA6ND36 823 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 KLF4O43474 513 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 NR3C2P08235 984 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 KCNA6P17658 529 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 MCM4P33991 863 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 TXLNAP40222 546 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 RBM6P78332 1123 aaKnown RBP3.46□□□□□ -1.86
MCF2-204ENST00000414978 SKOR1P84550 965 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 ALKBH2Q6NS38 261 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 TMEM214Q6NUQ4 689 aaKnown RBP3.46□□□□□ -1.86
MCF2-204ENST00000414978 TPTE2Q6XPS3 522 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 ANKS3Q6ZW76 656 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 ZNF438Q7Z4V0 828 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 TMTC2Q8N394 836 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 MRFAP1L1Q96HT8 127 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 PSMD1Q99460 953 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 CNTN3Q9P232 1028 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 SALL2Q9Y467 1007 aaPredicted RBP3.46□□□□□ -1.86
MCF2-204ENST00000414978 MSH6P52701 1360 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 WNK3Q9BYP7 1800 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 PCSK2P16519 638 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 MSS51Q4VC12 460 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 COL26A1Q96A83 441 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 GPRASP2Q96D09 838 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 IGFLR1Q9H665 355 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 GPAMQ9HCL2 828 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 FANCLQ9NW38 375 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 DDX56Q9NY93 547 aaKnown RBP3.46□□□□□ -1.86
MCF2-204ENST00000414978 TMEM94Q12767 1356 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 ATF4P18848 351 aaPredicted RBP3.46□□□□□ -1.86
MCF2-204ENST00000414978 EPHA4P54764 986 aa3.46□□□□□ -1.86
MCF2-204ENST00000414978 FCGRTP55899 365 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms