RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 C15orf52Q6ZUT6 534 aaKnown RBP18.78■□□□□ 0.6
SHMT2-202ENST00000414700 KBTBD3Q8NAB2 608 aa18.78■□□□□ 0.6
SHMT2-202ENST00000414700 JAG2Q9Y219 1238 aa18.78■□□□□ 0.6
SHMT2-202ENST00000414700 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
SHMT2-202ENST00000414700 PIH1D3Q9NQM4 214 aaKnown RBP18.78■□□□□ 0.6
SHMT2-202ENST00000414700 MYH7P12883 1935 aa18.77■□□□□ 0.6
SHMT2-202ENST00000414700 FHDC1Q9C0D6 1143 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-202ENST00000414700 CWC27Q6UX04 472 aaKnown RBP18.76■□□□□ 0.59
SHMT2-202ENST00000414700 FAM227BQ96M60 508 aa18.76■□□□□ 0.59
SHMT2-202ENST00000414700 GNL3LQ9NVN8 582 aaKnown RBP18.76■□□□□ 0.59
SHMT2-202ENST00000414700 DOCK2Q92608 1830 aa18.76■□□□□ 0.59
SHMT2-202ENST00000414700 FRAT2O75474 233 aaPredicted RBP18.76■□□□□ 0.59
SHMT2-202ENST00000414700 MFAP1P55081 439 aaKnown RBP18.76■□□□□ 0.59
SHMT2-202ENST00000414700 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
SHMT2-202ENST00000414700 DALRD3Q5D0E6 543 aaKnown RBP18.76■□□□□ 0.59
SHMT2-202ENST00000414700 CD209Q9NNX6 404 aa18.76■□□□□ 0.59
SHMT2-202ENST00000414700 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
SHMT2-202ENST00000414700 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 ESYT1Q9BSJ8 1104 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 RTFDC1Q9BY42 306 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 ZC3H12CQ9C0D7 883 aaKnown RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 DIAPH3Q9NSV4 1193 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 CC2D2BQ6DHV5 1058 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
SHMT2-202ENST00000414700 DENND2AQ9ULE3 1009 aa18.74■□□□□ 0.59
SHMT2-202ENST00000414700 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
SHMT2-202ENST00000414700 SOCS7O14512 581 aa18.73■□□□□ 0.59
SHMT2-202ENST00000414700 ABCF2Q9UG63 623 aa18.73■□□□□ 0.59
SHMT2-202ENST00000414700 FER1L6Q2WGJ9 1857 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 SCN9AQ15858 1988 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 SEMA3EO15041 775 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 IL1R1P14778 569 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 AOC3Q16853 763 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 DBNDD1Q9H9R9 158 aa18.72■□□□□ 0.59
SHMT2-202ENST00000414700 SGSM2O43147 1006 aa18.71■□□□□ 0.59
SHMT2-202ENST00000414700 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
SHMT2-202ENST00000414700 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
SHMT2-202ENST00000414700 RTKN2Q8IZC4 609 aa18.71■□□□□ 0.59
SHMT2-202ENST00000414700 EYA3Q99504 573 aa18.71■□□□□ 0.59
SHMT2-202ENST00000414700 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 SLC9C2Q5TAH2 1124 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 SYT17Q9BSW7 474 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 COA1Q9GZY4 146 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 KCNQ5Q9NR82 932 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 ZNF277Q9NRM2 450 aaPredicted RBP18.7■□□□□ 0.58
SHMT2-202ENST00000414700 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 COL4A5P29400 1685 aa18.7■□□□□ 0.58
SHMT2-202ENST00000414700 HIP1O00291 1037 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
SHMT2-202ENST00000414700 PRDX5P30044 214 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 SLC4A3P48751 1232 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 GRIK5Q16478 980 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 PSMD1Q99460 953 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 LRP2BPQ9P2M1 347 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
SHMT2-202ENST00000414700 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
SHMT2-202ENST00000414700 PPIP5K2O43314 1243 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 PDE6AP16499 860 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 ADD2P35612 726 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 ZMYM1Q5SVZ6 1142 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 MAGEB6Q8N7X4 407 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 ANO2Q9NQ90 1003 aa18.68■□□□□ 0.58
SHMT2-202ENST00000414700 TCRBV5S4A2TA0A5A2 114 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 NFKBIEO00221 500 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 GTF2IP78347 998 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.67■□□□□ 0.586e-7■■□□□ 14.2
SHMT2-202ENST00000414700 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
SHMT2-202ENST00000414700 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 M0R2C6 588 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 ZBTB22O15209 634 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 RAI14Q9P0K7 980 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 MAST3O60307 1309 aa18.67■□□□□ 0.58
SHMT2-202ENST00000414700 G3V3G9 751 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 ECE2O60344 883 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 ADGRA1Q86SQ6 560 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 RUFY2Q8WXA3 655 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 MXD3Q9BW11 206 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 ZNF646O15015 1829 aaPredicted RBP18.66■□□□□ 0.58
SHMT2-202ENST00000414700 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
SHMT2-202ENST00000414700 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 WDR66Q8TBY9 1149 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 FBXW7Q969H0 707 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
SHMT2-202ENST00000414700 YDJCA8MPS7 323 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms