RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 NUDCQ9Y266 331 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 MYBBP1AQ9BQG0 1328 aaKnown RBP6.47□□□□□ -1.37
VPS41-205ENST00000414632 MYH14Q7Z406 1995 aaKnown RBP6.46□□□□□ -1.37
VPS41-205ENST00000414632 ANKRD33BA6NCL7 494 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 H3BRB1 525 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 C4AP0C0L4 1744 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 ZNF16P17020 682 aaPredicted RBP6.46□□□□□ -1.38
VPS41-205ENST00000414632 SLC15A2Q16348 729 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 AKAP4Q5JQC9 854 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 CAPN12Q6ZSI9 719 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 SMIM5Q71RC9 77 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 GLYCTKQ8IVS8 523 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS41-205ENST00000414632 DCAF5Q96JK2 942 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 BCL2L13Q9BXK5 485 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 TUT1Q9H6E5 874 aaKnown RBP6.46□□□□□ -1.38
VPS41-205ENST00000414632 PRKRIP1Q9H875 184 aaPredicted RBP6.46□□□□□ -1.38
VPS41-205ENST00000414632 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 MRC1P22897 1456 aa6.46□□□□□ -1.38
VPS41-205ENST00000414632 MAP3K5Q99683 1374 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 PLEKHG2Q9H7P9 1386 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 SENP3-EIF4A1A0A087X0R7 540 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 ERVV-2B6SEH9 535 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 M0R2N6 131 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 PPEF1O14829 653 aaPredicted RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 RNMTO43148 476 aaKnown RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 ZBTB24O43167 697 aaPredicted RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 ZBTB7AO95365 584 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 HSP90AB1P08238 724 aaKnown RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 SCTRP47872 440 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 FKBP4Q02790 459 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS41-205ENST00000414632 DCTN1Q14203 1278 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 INTS6LQ5JSJ4 861 aaKnown RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 VASH1Q7L8A9 365 aaPredicted RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 CCDC146Q8IYE0 955 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 GAS2L2Q8NHY3 880 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 KIAA1522Q9P206 1035 aaPredicted RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 HCSTQ9UBK5 93 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 DNMT3AQ9Y6K1 912 aaPredicted RBP6.45□□□□□ -1.38
VPS41-205ENST00000414632 ZNF831Q5JPB2 1677 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 KCPQ6ZWJ8 1503 aa6.45□□□□□ -1.38
VPS41-205ENST00000414632 KDM3BQ7LBC6 1761 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 GNAT3A8MTJ3 354 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 C21orf2O43822 256 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 PTCD1O75127 700 aaKnown RBP6.44□□□□□ -1.38
VPS41-205ENST00000414632 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
VPS41-205ENST00000414632 TRIM32Q13049 653 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 SLC39A6Q13433 755 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 FKBP5Q13451 457 aaPredicted RBP6.44□□□□□ -1.38
VPS41-205ENST00000414632 ITPK1Q13572 414 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 ECM1Q16610 540 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 CCDC184Q52MB2 194 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 SLC27A3Q5K4L6 730 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 MCM10Q7L590 875 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 GIPC2Q8TF65 315 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 SMARCC1Q92922 1105 aaPredicted RBP6.44□□□□□ -1.38
VPS41-205ENST00000414632 SLC4A9Q96Q91 983 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 PURBQ96QR8 312 aaKnown RBP6.44□□□□□ -1.38
VPS41-205ENST00000414632 ZNF358Q9NW07 568 aa6.44□□□□□ -1.38
VPS41-205ENST00000414632 CICQ96RK0 1608 aaPredicted RBP6.43□□□□□ -1.38
VPS41-205ENST00000414632 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 LOC102724428A0A0B4J2F2 783 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 IGSF3O75054 1194 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 SIK1P57059 783 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 SKOR1P84550 965 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 MTMR3Q13615 1198 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 AMIGO3Q86WK7 504 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 NPAS4Q8IUM7 802 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 IL17REQ8NFR9 667 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 MRRFQ96E11 262 aaKnown RBP6.43□□□□□ -1.38
VPS41-205ENST00000414632 SLC52A2Q9HAB3 445 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 TFCP2L1Q9NZI6 479 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 RRP7AQ9Y3A4 280 aaKnown RBP6.43□□□□□ -1.38
VPS41-205ENST00000414632 MAP4K5Q9Y4K4 846 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 LAMB4A4D0S4 1761 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 PNPLA7Q6ZV29 1317 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 MAPK8IP3Q9UPT6 1336 aa6.43□□□□□ -1.38
VPS41-205ENST00000414632 TMEM229AB2RXF0 380 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 ANP32CO43423 234 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 KCNQ3O43525 872 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 MAPK1P28482 360 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 WNT7BP56706 349 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 ERVK-9P63128 1117 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 TEFQ10587 303 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 NAA30Q147X3 362 aaPredicted RBP6.42□□□□□ -1.38
VPS41-205ENST00000414632 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 WDR43Q15061 677 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS41-205ENST00000414632 MSL1Q68DK7 614 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 PLEKHF1Q96S99 279 aa6.42□□□□□ -1.38
VPS41-205ENST00000414632 THUMPD2Q9BTF0 503 aaKnown RBP6.42□□□□□ -1.38
VPS41-205ENST00000414632 RNF223E7ERA6 249 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 STAU1O95793 577 aaKnown RBP6.41□□□□□ -1.38
VPS41-205ENST00000414632 NEFMP07197 916 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 IGFBP4P22692 258 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 GDF10P55107 478 aa6.41□□□□□ -1.38
VPS41-205ENST00000414632 ARHGAP4P98171 946 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms