RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 ALKBH8Q96BT7 664 aaKnown RBP10.02□□□□□ -0.81
ATG4C-204ENST00000414558 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 WISP1O95388 367 aa10.01□□□□□ -0.81
ATG4C-204ENST00000414558 GLB1P16278 677 aa10.01□□□□□ -0.81
ATG4C-204ENST00000414558 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
ATG4C-204ENST00000414558 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
ATG4C-204ENST00000414558 TRAIPQ9BWF2 469 aa10.01□□□□□ -0.81
ATG4C-204ENST00000414558 NIF3L1Q9GZT8 377 aa10.01□□□□□ -0.81
ATG4C-204ENST00000414558 ADAM11O75078 769 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 ITGB7P26010 798 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 CCNJLQ8IV13 435 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 CEP41Q9BYV8 373 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 LIN7BQ9HAP6 207 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
ATG4C-204ENST00000414558 EIF1AYO14602 144 aaKnown RBP9.99□□□□□ -0.81
ATG4C-204ENST00000414558 DDX3YO15523 660 aaKnown RBP9.99□□□□□ -0.81
ATG4C-204ENST00000414558 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
ATG4C-204ENST00000414558 NLRP12P59046 1061 aa9.99□□□□□ -0.81
ATG4C-204ENST00000414558 KIAA0319Q5VV43 1072 aa9.99□□□□□ -0.81
ATG4C-204ENST00000414558 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
ATG4C-204ENST00000414558 NPHS2Q9NP85 383 aa9.99□□□□□ -0.81
ATG4C-204ENST00000414558 METTL12A8MUP2 240 aa9.98□□□□□ -0.81
ATG4C-204ENST00000414558 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
ATG4C-204ENST00000414558 SOX1O00570 391 aaPredicted RBP9.98□□□□□ -0.81
ATG4C-204ENST00000414558 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
ATG4C-204ENST00000414558 TMC7Q7Z402 723 aa9.98□□□□□ -0.81
ATG4C-204ENST00000414558 UBASH3BQ8TF42 649 aa9.98□□□□□ -0.81
ATG4C-204ENST00000414558 A0A096LPE4 126 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 A0A1W2PPZ6 126 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 ESRRAP11474 423 aaPredicted RBP9.97□□□□□ -0.81
ATG4C-204ENST00000414558 MAPK1P28482 360 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 CCDC74AQ96AQ1 378 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 CSRNP1Q96S65 589 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 TCF12Q99081 682 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 EHD4Q9H223 541 aa9.97□□□□□ -0.81
ATG4C-204ENST00000414558 PRR23CQ6ZRP0 262 aa9.96□□□□□ -0.82
ATG4C-204ENST00000414558 LOC100996750A0A140TA64 210 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 GRIA4P48058 902 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 UVSSAQ2YD98 709 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 HGSNATQ68CP4 663 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 KRTAP4-6Q9BYQ5 205 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
ATG4C-204ENST00000414558 CLEC4MQ9H2X3 399 aaPredicted RBP9.95□□□□□ -0.82
ATG4C-204ENST00000414558 ANKRD34AQ69YU3 496 aa9.94□□□□□ -0.82
ATG4C-204ENST00000414558 UBL7Q96S82 380 aaPredicted RBP9.94□□□□□ -0.82
ATG4C-204ENST00000414558 RUSC1Q9BVN2 902 aa9.94□□□□□ -0.82
ATG4C-204ENST00000414558 GADD45BO75293 160 aaPredicted RBP9.93□□□□□ -0.82
ATG4C-204ENST00000414558 PCDH1Q08174 1060 aa9.93□□□□□ -0.82
ATG4C-204ENST00000414558 SPRED3Q2MJR0 410 aa9.93□□□□□ -0.82
ATG4C-204ENST00000414558 TRAK1Q9UPV9 953 aa9.93□□□□□ -0.82
ATG4C-204ENST00000414558 GSTM4Q03013 218 aa9.92□□□□□ -0.82
ATG4C-204ENST00000414558 ZMYM1Q5SVZ6 1142 aa9.92□□□□□ -0.82
ATG4C-204ENST00000414558 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
ATG4C-204ENST00000414558 UTP4Q969X6 686 aaKnown RBP9.92□□□□□ -0.82
ATG4C-204ENST00000414558 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
ATG4C-204ENST00000414558 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
ATG4C-204ENST00000414558 DHX15O43143 795 aaKnown RBP9.91□□□□□ -0.82
ATG4C-204ENST00000414558 TREHO43280 583 aa9.91□□□□□ -0.82
ATG4C-204ENST00000414558 ITPKAP23677 461 aa9.91□□□□□ -0.82
ATG4C-204ENST00000414558 PLCB3Q01970 1234 aa9.91□□□□□ -0.82
ATG4C-204ENST00000414558 FDX2Q6P4F2 183 aa9.91□□□□□ -0.82
ATG4C-204ENST00000414558 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
ATG4C-204ENST00000414558 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
ATG4C-204ENST00000414558 FAM46AQ96IP4 442 aaKnown RBP9.91□□□□□ -0.82
ATG4C-204ENST00000414558 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 SART1O43290 800 aaKnown RBP9.9□□□□□ -0.82
ATG4C-204ENST00000414558 PTPN12Q05209 780 aaKnown RBP9.9□□□□□ -0.82
ATG4C-204ENST00000414558 DSC3Q14574 896 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 ABCB6Q9NP58 842 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 RAXQ9Y2V3 346 aa9.9□□□□□ -0.82
ATG4C-204ENST00000414558 ZNF423Q2M1K9 1284 aa9.89□□□□□ -0.83
ATG4C-204ENST00000414558 NUTM2GQ5VZR2 741 aa9.89□□□□□ -0.83
ATG4C-204ENST00000414558 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
ATG4C-204ENST00000414558 ARMC10Q8N2F6 343 aa9.89□□□□□ -0.83
ATG4C-204ENST00000414558 EPS8L3Q8TE67 593 aaKnown RBP9.89□□□□□ -0.83
ATG4C-204ENST00000414558 B3GALT4O96024 378 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 CYP11A1P05108 521 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 GRM2Q14416 872 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 MYRFLQ96LU7 910 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 TMPRSS13Q9BYE2 586 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 STOML1Q9UBI4 398 aa9.88□□□□□ -0.83
ATG4C-204ENST00000414558 PNMA6FA0A0J9YX94 578 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 TMEM238LA0A1B0GVL6 79 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 PREPP48147 710 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 ENOX2Q16206 610 aaKnown RBP9.87□□□□□ -0.83
ATG4C-204ENST00000414558 RPS26P11Q5JNZ5 115 aaPredicted RBP9.87□□□□□ -0.83
ATG4C-204ENST00000414558 HP1BP3Q5SSJ5 553 aaPredicted RBP9.87□□□□□ -0.83
ATG4C-204ENST00000414558 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.87□□□□□ -0.83
ATG4C-204ENST00000414558 ASB16Q96NS5 453 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 NRSN2Q9GZP1 204 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 ZFYVE1Q9HBF4 777 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 CYP4F12Q9HCS2 524 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
ATG4C-204ENST00000414558 GSC2O15499 205 aa9.86□□□□□ -0.83
ATG4C-204ENST00000414558 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
ATG4C-204ENST00000414558 FSTP19883 344 aa9.86□□□□□ -0.83
ATG4C-204ENST00000414558 EXOSC6Q5RKV6 272 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms