RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CA12O43570 354 aa21.09■□□□□ 0.97
SCAMP4-204ENST00000414057 LBX1P52954 281 aa21.09■□□□□ 0.97
SCAMP4-204ENST00000414057 GTF2IP78347 998 aa21.09■□□□□ 0.97
SCAMP4-204ENST00000414057 AOC2O75106 756 aa21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 KLRK1P26718 216 aa21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 CCDC102AQ96A19 550 aa21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 CDCA5Q96FF9 252 aa21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 SUCLG2Q96I99 432 aa21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 ZNF594Q96JF6 807 aaPredicted RBP21.08■□□□□ 0.97
SCAMP4-204ENST00000414057 ASTN2O75129 1339 aaPredicted RBP21.08■□□□□ 0.96
SCAMP4-204ENST00000414057 FKBP1BP68106 108 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 RGMBQ6NW40 437 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 DLK2Q6UY11 383 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 MXD3Q9BW11 206 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 TNNQ9UQP3 1299 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 THSD7BQ9C0I4 1608 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 HSPA8P11142 646 aaKnown RBP21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
SCAMP4-204ENST00000414057 WNT10BO00744 389 aa21.06■□□□□ 0.96
SCAMP4-204ENST00000414057 IL1R1P14778 569 aa21.06■□□□□ 0.96
SCAMP4-204ENST00000414057 KIAA0825Q8IV33 1275 aa21.06■□□□□ 0.96
SCAMP4-204ENST00000414057 ITPRIPQ8IWB1 547 aa21.06■□□□□ 0.96
SCAMP4-204ENST00000414057 TMEM57Q8N5G2 664 aa21.06■□□□□ 0.96
SCAMP4-204ENST00000414057 SNAP23O00161 211 aa21.05■□□□□ 0.96
SCAMP4-204ENST00000414057 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
SCAMP4-204ENST00000414057 NBPF9Q3BBW0 867 aa21.05■□□□□ 0.96
SCAMP4-204ENST00000414057 RABL6Q3YEC7 729 aaPredicted RBP21.05■□□□□ 0.96
SCAMP4-204ENST00000414057 BICC1Q9H694 974 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-204ENST00000414057 MROH5Q6ZUA9 1318 aa21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 IRS2Q9Y4H2 1338 aa21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 NF2P35240 595 aa21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 ZNF157P51786 506 aaPredicted RBP21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 FKBP1AP62942 108 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 KAZALD1Q96I82 304 aa21.04■□□□□ 0.96
SCAMP4-204ENST00000414057 APOBEC3FQ8IUX4 373 aaKnown RBP21.03■□□□□ 0.96
SCAMP4-204ENST00000414057 SASH1O94885 1247 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 DLGAP5Q15398 846 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 USP44Q9H0E7 712 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 MYO1BO43795 1136 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 CAPN15O75808 1086 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 HIBADHP31937 336 aaKnown RBP21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 REM2Q8IYK8 340 aaPredicted RBP21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 RIPOR2Q9Y4F9 1068 aa21.01■□□□□ 0.95
SCAMP4-204ENST00000414057 POLR2AP24928 1970 aaKnown RBP21■□□□□ 0.95
SCAMP4-204ENST00000414057 FAM155AB1AL88 458 aaPredicted RBP21■□□□□ 0.95
SCAMP4-204ENST00000414057 ANKRD44Q8N8A2 993 aa21■□□□□ 0.95
SCAMP4-204ENST00000414057 MTMR14Q8NCE2 650 aa21■□□□□ 0.95
SCAMP4-204ENST00000414057 PUS3Q9BZE2 481 aaKnown RBP21■□□□□ 0.95
SCAMP4-204ENST00000414057 METTL24Q5JXM2 366 aa20.99■□□□□ 0.95
SCAMP4-204ENST00000414057 VPS37DQ86XT2 251 aa20.99■□□□□ 0.95
SCAMP4-204ENST00000414057 ZBED3Q96IU2 234 aaPredicted RBP20.99■□□□□ 0.95
SCAMP4-204ENST00000414057 SLC10A3P09131 477 aa20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 TTLL12Q14166 644 aaPredicted RBP20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 CAVIN4Q5BKX8 364 aa20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 CERS5Q8N5B7 392 aa20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 TDRD7Q8NHU6 1098 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 ZBTB40Q9NUA8 1239 aa20.98■□□□□ 0.95
SCAMP4-204ENST00000414057 KIF23Q02241 960 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-204ENST00000414057 CENPQQ7L2Z9 268 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-204ENST00000414057 FAM84BQ96KN1 310 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-204ENST00000414057 FAM205AQ6ZU69 1335 aa20.97■□□□□ 0.95
SCAMP4-204ENST00000414057 F8W031 263 aaPredicted RBP20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 ZBTB7BO15156 539 aaPredicted RBP20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 PDE8BO95263 885 aa20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 GYG1P46976 350 aa20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 SAGE1Q9NXZ1 904 aa20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 SCAF8Q9UPN6 1271 aaKnown RBP20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 PPP2R3BQ9Y5P8 575 aa20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 PAPPA2Q9BXP8 1791 aa20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 ZNF646O15015 1829 aaPredicted RBP20.96■□□□□ 0.95
SCAMP4-204ENST00000414057 UBTFL1P0CB47 393 aaPredicted RBP20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 CFAP100Q494V2 611 aa20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 LRRC24Q50LG9 513 aa20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 MFSD14BQ5SR56 506 aa20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 ARMC9Q7Z3E5 817 aa20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 TSKSQ9UJT2 592 aa20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 COL1A1P02452 1464 aaPredicted RBP20.95■□□□□ 0.94
SCAMP4-204ENST00000414057 FRAT2O75474 233 aaPredicted RBP20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 RBM5P52756 815 aaKnown RBP eCLIP20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 PRAMEF18Q5VWM3 479 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 ZIC5Q96T25 663 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 JAG2Q9Y219 1238 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 A0A1B0GUL6 1792 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 SPDYE2BA6NHP3 402 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 SPDYE6P0CI01 402 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 RASAL3Q86YV0 1011 aa20.94■□□□□ 0.94
SCAMP4-204ENST00000414057 IFIT1P09914 478 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 FBXO33Q7Z6M2 555 aa20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 TBC1D22AQ8WUA7 517 aa20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 DEFB129Q9H1M3 183 aa20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 SERPINA10Q9UK55 444 aa20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 FBXO3Q9UK99 471 aa20.93■□□□□ 0.94
SCAMP4-204ENST00000414057 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
SCAMP4-204ENST00000414057 PUM3Q15397 648 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-204ENST00000414057 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-204ENST00000414057 TTF2Q9UNY4 1162 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-204ENST00000414057 EYA2O00167 538 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms