RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DDB1Q16531 1140 aa11.15□□□□□ -0.63
SNHG3-201ENST00000413987 G2E3Q7L622 706 aa11.15□□□□□ -0.63
SNHG3-201ENST00000413987 ACSBG1Q96GR2 724 aa11.15□□□□□ -0.63
SNHG3-201ENST00000413987 GMLQ99445 158 aa11.15□□□□□ -0.63
SNHG3-201ENST00000413987 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.63
SNHG3-201ENST00000413987 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
SNHG3-201ENST00000413987 MAPRE1Q15691 268 aaKnown RBP11.14□□□□□ -0.63
SNHG3-201ENST00000413987 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
SNHG3-201ENST00000413987 CLEC17AQ6ZS10 378 aa11.14□□□□□ -0.63
SNHG3-201ENST00000413987 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
SNHG3-201ENST00000413987 ZNF496Q96IT1 587 aaPredicted RBP11.14□□□□□ -0.63
SNHG3-201ENST00000413987 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
SNHG3-201ENST00000413987 MAFBQ9Y5Q3 323 aaPredicted RBP11.14□□□□□ -0.63
SNHG3-201ENST00000413987 SOCS7O14512 581 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 LDHCP07864 332 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 CT47B1P0C2W7 299 aaPredicted RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 KCTD2Q14681 263 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 VPS72Q15906 364 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 KLHL40Q2TBA0 621 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 MARCH10Q8NA82 808 aaPredicted RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 SLC39A13Q96H72 371 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 AVENQ9NQS1 362 aaPredicted RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 NOL7Q9UMY1 257 aaKnown RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 DPYSL4O14531 572 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 PDIA6Q15084 440 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 SVIPQ8NHG7 77 aa11.13□□□□□ -0.63
SNHG3-201ENST00000413987 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
SNHG3-201ENST00000413987 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
SNHG3-201ENST00000413987 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 R3HCC1Q9Y3T6 440 aaKnown RBP11.12□□□□□ -0.63
SNHG3-201ENST00000413987 MRC1P22897 1456 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 ZNF445P59923 1031 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
SNHG3-201ENST00000413987 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 ATF7IPQ6VMQ6 1270 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 PIGBQ92521 554 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 ASAP1Q9ULH1 1129 aa11.12□□□□□ -0.63
SNHG3-201ENST00000413987 GLI3P10071 1580 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 C5P01031 1676 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 F6X3S4 739 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 RGS20O76081 388 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 TNNI2P48788 182 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 MVPQ14764 893 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 PAF1Q8N7H5 531 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 PHAXQ9H814 394 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 KCNQ2O43526 872 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 UQCRHP07919 91 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 COL6A1P12109 1028 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 GNALP38405 381 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 ALG2Q9H553 416 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 TMOD3Q9NYL9 352 aa11.11□□□□□ -0.63
SNHG3-201ENST00000413987 THRAP3Q9Y2W1 955 aaKnown RBP11.11□□□□□ -0.63
SNHG3-201ENST00000413987 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
SNHG3-201ENST00000413987 GJD4Q96KN9 370 aaPredicted RBP11.1□□□□□ -0.63
SNHG3-201ENST00000413987 ARPC5LQ9BPX5 153 aa11.1□□□□□ -0.63
SNHG3-201ENST00000413987 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
SNHG3-201ENST00000413987 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
SNHG3-201ENST00000413987 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
SNHG3-201ENST00000413987 ELOAQ14241 798 aaKnown RBP11.09□□□□□ -0.63
SNHG3-201ENST00000413987 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 BABAM1Q9NWV8 329 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
SNHG3-201ENST00000413987 RGS12O14924 1447 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 ITGB4P16144 1822 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
SNHG3-201ENST00000413987 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
SNHG3-201ENST00000413987 TYW1Q9NV66 732 aaKnown RBP11.09□□□□□ -0.63
SNHG3-201ENST00000413987 PLEKHG2Q9H7P9 1386 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 ENPP3O14638 875 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 MYL6BP14649 208 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 GNL2Q13823 731 aaKnown RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 SASS6Q6UVJ0 657 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 PDLIM2Q96JY6 352 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms