RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 PUS7LQ9H0K6 701 aaKnown RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 PRC1O43663 620 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 ZAP70P43403 619 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 RTEL1Q9NZ71 1219 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 DCCP43146 1447 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 KCPQ6ZWJ8 1503 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 KLF18A0A0U1RQI7 1052 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 A0A1B0GVL5 298 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 PI16Q6UXB8 463 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 DHX40Q8IX18 779 aaKnown RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 FMR1NBQ8N0W7 255 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 MRPS27Q92552 414 aaKnown RBP17.49■□□□□ 0.39
TTC39A-208ENST00000413473 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
TTC39A-208ENST00000413473 PARP4Q9UKK3 1724 aaKnown RBP17.48■□□□□ 0.39
TTC39A-208ENST00000413473 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 C8orf76Q96K31 380 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
TTC39A-208ENST00000413473 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 MB21D2Q8IYB1 491 aaPredicted RBP17.48■□□□□ 0.39
TTC39A-208ENST00000413473 APPBP2Q92624 585 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 HPS5Q9UPZ3 1129 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
TTC39A-208ENST00000413473 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 TNNT1P13805 278 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 GJB4Q9NTQ9 266 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
TTC39A-208ENST00000413473 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
TTC39A-208ENST00000413473 IL2RBP14784 551 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 STK38Q15208 465 aa17.47■□□□□ 0.39
TTC39A-208ENST00000413473 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 CTIFO43310 598 aaKnown RBP17.46■□□□□ 0.39
TTC39A-208ENST00000413473 NDUFA8P51970 172 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 ANTXR2P58335 489 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
TTC39A-208ENST00000413473 TPD52L1Q16890 204 aaPredicted RBP17.46■□□□□ 0.39
TTC39A-208ENST00000413473 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 NCOA7Q8NI08 942 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 ZNF213O14771 459 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 TRIM28Q13263 835 aaKnown RBP17.46■□□□□ 0.39
TTC39A-208ENST00000413473 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
TTC39A-208ENST00000413473 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
TTC39A-208ENST00000413473 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 CPLX1O14810 134 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 GPAA1O43292 621 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
TTC39A-208ENST00000413473 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 AOPEPQ8N6M6 819 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 NWD2Q9ULI1 1742 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 CSF1RP07333 972 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 STRCP1A6NGW2 1772 aa17.45■□□□□ 0.38
TTC39A-208ENST00000413473 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
TTC39A-208ENST00000413473 SPTLC2O15270 562 aa17.44■□□□□ 0.38
TTC39A-208ENST00000413473 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
TTC39A-208ENST00000413473 MYSM1Q5VVJ2 828 aa17.44■□□□□ 0.38
TTC39A-208ENST00000413473 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
TTC39A-208ENST00000413473 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
TTC39A-208ENST00000413473 POLR3EQ9NVU0 708 aa17.44■□□□□ 0.38
TTC39A-208ENST00000413473 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 ATP2B3Q16720 1220 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 METTL24Q5JXM2 366 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 BRINP3Q76B58 766 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 NEMFO60524 1076 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 YEATS4O95619 227 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 MCAMP43121 646 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 ANKRD7Q92527 254 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 TMOD3Q9NYL9 352 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 KIAA1468Q9P260 1216 aa17.43■□□□□ 0.38
TTC39A-208ENST00000413473 KIF28PB7ZC32 967 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 SKILP12757 684 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
TTC39A-208ENST00000413473 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 BRAPQ7Z569 592 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 TNS2Q63HR2 1409 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 CCDC69A6NI79 296 aa17.42■□□□□ 0.38
TTC39A-208ENST00000413473 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms