RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 RASSF7Q02833 373 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 AOC3Q16853 763 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 CDK5RAP2Q96SN8 1893 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 GOLIM4O00461 696 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 WASHC4Q2M389 1173 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 COA1Q9GZY4 146 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
SMARCAL1-204ENST00000412913 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 TRIM6-TRIM34B2RNG4 842 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 CHGBP05060 677 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 RILPL2Q969X0 211 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
SMARCAL1-204ENST00000412913 ECM29Q5VYK3 1845 aa12.83□□□□□ -0.35
SMARCAL1-204ENST00000412913 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 ECE2O60344 883 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 CDC45O75419 566 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 TBC1D9Q6ZT07 1266 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 IL25Q9H293 177 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
SMARCAL1-204ENST00000412913 CHMLP26374 656 aa12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 ZNF384Q8TF68 577 aa12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 LAMA4Q16363 1823 aa12.82□□□□□ -0.36
SMARCAL1-204ENST00000412913 PRDX5P30044 214 aa12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 TTF1Q15361 905 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 GRIK5Q16478 980 aa12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 LAMB1P07942 1786 aa12.81□□□□□ -0.36
SMARCAL1-204ENST00000412913 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 ADD2P35612 726 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 KCNQ5Q9NR82 932 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
SMARCAL1-204ENST00000412913 PDE6AP16499 860 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 GTF2IP78347 998 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 WDR66Q8TBY9 1149 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 FAM227BQ96M60 508 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 BACH2Q9BYV9 841 aa12.79□□□□□ -0.36
SMARCAL1-204ENST00000412913 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 DACT2Q5SW24 774 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 MXD3Q9BW11 206 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 MAST3O60307 1309 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 RAD50Q92878 1312 aa12.78□□□□□ -0.36
SMARCAL1-204ENST00000412913 M0R2C6 588 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 SGSM2O43147 1006 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 SEC24BO95487 1268 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 STRIP1Q5VSL9 837 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 NIM1KQ8IY84 436 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 ZGPATQ8N5A5 531 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 OSBP2Q969R2 916 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 ABCF2Q9UG63 623 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.37
SMARCAL1-204ENST00000412913 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
SMARCAL1-204ENST00000412913 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
SMARCAL1-204ENST00000412913 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
SMARCAL1-204ENST00000412913 FZD9O00144 591 aa12.76□□□□□ -0.37
SMARCAL1-204ENST00000412913 HIP1O00291 1037 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms