RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 WDR19Q8NEZ3 1342 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 NR1I2O75469 434 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 CKAP2LQ8IYA6 745 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
TRAFD1-202ENST00000412615 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.25
TRAFD1-202ENST00000412615 FOSBP53539 338 aa13.46□□□□□ -0.25
TRAFD1-202ENST00000412615 CCDC102BQ68D86 513 aa13.46□□□□□ -0.25
TRAFD1-202ENST00000412615 LPIN2Q92539 896 aa13.46□□□□□ -0.25
TRAFD1-202ENST00000412615 UBN2Q6ZU65 1347 aa13.46□□□□□ -0.26
TRAFD1-202ENST00000412615 ARID4AP29374 1257 aaPredicted RBP13.46□□□□□ -0.26
TRAFD1-202ENST00000412615 CEBPZQ03701 1054 aaKnown RBP13.46□□□□□ -0.26
TRAFD1-202ENST00000412615 TRDNQ13061 729 aa13.46□□□□□ -0.26
TRAFD1-202ENST00000412615 PUM3Q15397 648 aaKnown RBP13.46□□□□□ -0.26
TRAFD1-202ENST00000412615 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 KLF18A0A0U1RQI7 1052 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 ATRNO75882 1429 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 CTAGE5O15320 804 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 IDH1O75874 414 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 CAVIN2O95810 425 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 TPM3P06753 285 aa13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-202ENST00000412615 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 USP28Q96RU2 1077 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 CPLX1O14810 134 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 AP5Z1O43299 807 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 FGFR2P21802 821 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 PHKA1P46020 1223 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 ANTXR2P58335 489 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 CCAR1Q8IX12 1150 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-202ENST00000412615 ZNF532Q9HCE3 1301 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 APPP05067 770 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 SLC5A1P13866 664 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 CCDC73Q6ZRK6 1079 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 MYH3P11055 1940 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 NUP98P52948 1817 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 PDE6AP16499 860 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 DDB1Q16531 1140 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 MPNDQ8N594 471 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 PIBF1Q8WXW3 757 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 UTP14AQ9BVJ6 771 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 ORC3Q9UBD5 711 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-202ENST00000412615 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 RGS22Q8NE09 1264 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 TTC12Q9H892 705 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 ZNF165P49910 485 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 FBXO18Q8NFZ0 1043 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 AIDAQ96BJ3 306 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 ANGEL1Q9UNK9 670 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
TRAFD1-202ENST00000412615 MYH7P12883 1935 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 ME1P48163 572 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 ALX1Q15699 326 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 NBPF3Q9H094 633 aa13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-202ENST00000412615 COL16A1Q07092 1604 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-202ENST00000412615 FAM160A1Q05DH4 1040 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms