RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 ZNF438Q7Z4V0 828 aa5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 AGBL5Q8NDL9 886 aa5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 USP26Q9BXU7 913 aa5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 TNFRSF10BO14763 440 aa5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 PDE12Q6L8Q7 609 aaKnown RBP5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 SHISA5Q8N114 240 aa5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 TBC1D32Q96NH3 1257 aa5.49□□□□□ -1.53
HMGB3P2-201ENST00000411913 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 CES1P23141 567 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 OCLNQ16625 522 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 DUSP27Q5VZP5 1158 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 NFXL1Q6ZNB6 911 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 ABTB2Q8N961 1025 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 YIPF2Q9BWQ6 316 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 DZANK1Q9NVP4 752 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 TMEM63CQ9P1W3 806 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 CNTN3Q9P232 1028 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 STIM2Q9P246 746 aa5.48□□□□□ -1.53
HMGB3P2-201ENST00000411913 ZBTB39O15060 712 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 TRPA1O75762 1119 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 DRD2P14416 443 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 ACPPP15309 386 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 IKBKEQ14164 716 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 ZNF648Q5T619 568 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 CDPF1Q6NVV7 123 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 CAPN12Q6ZSI9 719 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 SUGCTQ9HAC7 445 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 LRRC4CQ9HCJ2 640 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 PAK6Q9NQU5 681 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 SALL4Q9UJQ4 1053 aa5.47□□□□□ -1.53
HMGB3P2-201ENST00000411913 NFKBIEO00221 500 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 SOX1O00570 391 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 TIAF1O95411 115 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 ADMP35318 185 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 COL19A1Q14993 1142 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 EXOSC6Q5RKV6 272 aaKnown RBP5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZAR1Q86SH2 424 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 TTC16Q8NEE8 873 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 NUDT16Q96DE0 195 aaKnown RBP5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 SOX13Q9UN79 622 aa5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P2-201ENST00000411913 LOC100289279A0A1B0GTE1 492 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 FAM170BA6NMN3 283 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 BIN1O00499 593 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 CFAP70Q5T0N1 1121 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 C1orf127Q8N9H9 656 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 BSNDQ8WZ55 320 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 HHIPQ96QV1 700 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 PRKAG2Q9UGJ0 569 aa5.45□□□□□ -1.54
HMGB3P2-201ENST00000411913 PCSK2P16519 638 aa5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 CYP27A1Q02318 531 aa5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 SOX4Q06945 474 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZNF124Q15973 351 aa5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 PKN1Q16512 942 aa5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 TMEM102Q8N9M5 508 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 C2CD4AQ8NCU7 369 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 PMEPA1Q969W9 287 aa5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 CXXC1Q9P0U4 656 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZC3H7BQ9UGR2 993 aaKnown RBP5.44□□□□□ -1.54
HMGB3P2-201ENST00000411913 DBX1A6NMT0 343 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 PAPLNO95428 1278 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 DLGAP3O95886 979 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 PLCL1Q15111 1095 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 ATCAYQ86WG3 371 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 NXPE3Q969Y0 559 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 OSMRQ99650 979 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 SLC5A6Q9Y289 635 aa5.43□□□□□ -1.54
HMGB3P2-201ENST00000411913 GSTM4Q03013 218 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 FAM69CQ0P6D2 419 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 MAP7Q14244 749 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 C8orf34Q49A92 452 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 FBLN7Q53RD9 439 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 EDEM1Q92611 657 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 EZH1Q92800 747 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZMIZ1Q9ULJ6 1067 aa5.42□□□□□ -1.54
HMGB3P2-201ENST00000411913 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 FARP2O94887 1054 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 NFICP08651 508 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 RAB6AP20340 208 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 DNM1Q05193 864 aaKnown RBP5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 XKR5Q6UX68 686 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZNF765Q7L2R6 523 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 STK32AQ8WU08 396 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZKSCAN3Q9BRR0 538 aa5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 SOX17Q9H6I2 414 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P2-201ENST00000411913 ELOAQ14241 798 aaKnown RBP5.4□□□□□ -1.54
HMGB3P2-201ENST00000411913 ZNF792Q3KQV3 632 aa5.4□□□□□ -1.54
HMGB3P2-201ENST00000411913 DYMQ7RTS9 669 aa5.4□□□□□ -1.54
HMGB3P2-201ENST00000411913 KSR1Q8IVT5 923 aa5.4□□□□□ -1.54
HMGB3P2-201ENST00000411913 STK11IPQ8N1F8 1099 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms