RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
LSM5-207ENST00000410044 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
LSM5-207ENST00000410044 FKBP1AP62942 108 aaKnown RBP18.58■□□□□ 0.56
LSM5-207ENST00000410044 RASGRF1Q13972 1273 aa18.58■□□□□ 0.56
LSM5-207ENST00000410044 SCARF1Q14162 830 aa18.58■□□□□ 0.56
LSM5-207ENST00000410044 STRIP1Q5VSL9 837 aa18.58■□□□□ 0.56
LSM5-207ENST00000410044 HAUS7Q99871 368 aa18.58■□□□□ 0.56
LSM5-207ENST00000410044 BCL11AQ9H165 835 aa18.58■□□□□ 0.56
LSM5-207ENST00000410044 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
LSM5-207ENST00000410044 SPATA5Q8NB90 893 aa18.57■□□□□ 0.56
LSM5-207ENST00000410044 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
LSM5-207ENST00000410044 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
LSM5-207ENST00000410044 ZNF646O15015 1829 aaPredicted RBP18.56■□□□□ 0.56
LSM5-207ENST00000410044 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
LSM5-207ENST00000410044 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 IGSF3O75054 1194 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 VIL1P09327 827 aaKnown RBP18.56■□□□□ 0.56
LSM5-207ENST00000410044 CXCL9Q07325 125 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 TTLL5Q6EMB2 1281 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 USP17L1Q7RTZ2 530 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 WDR66Q8TBY9 1149 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 BOLA2Q9H3K6 86 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 RNF181Q9P0P0 153 aa18.56■□□□□ 0.56
LSM5-207ENST00000410044 IQSEC3Q9UPP2 1182 aaPredicted RBP18.56■□□□□ 0.56
LSM5-207ENST00000410044 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
LSM5-207ENST00000410044 GTF2IP78347 998 aa18.55■□□□□ 0.56
LSM5-207ENST00000410044 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
LSM5-207ENST00000410044 COL1A1P02452 1464 aaPredicted RBP18.54■□□□□ 0.56
LSM5-207ENST00000410044 ZAP70P43403 619 aa18.54■□□□□ 0.56
LSM5-207ENST00000410044 DACT2Q5SW24 774 aa18.54■□□□□ 0.56
LSM5-207ENST00000410044 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
LSM5-207ENST00000410044 CYP2E1P05181 493 aaPredicted RBP18.53■□□□□ 0.56
LSM5-207ENST00000410044 EIF6P56537 245 aaKnown RBP18.53■□□□□ 0.56
LSM5-207ENST00000410044 TNIP1Q15025 636 aa18.53■□□□□ 0.56
LSM5-207ENST00000410044 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
LSM5-207ENST00000410044 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
LSM5-207ENST00000410044 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
LSM5-207ENST00000410044 PSMD14O00487 310 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 TTF1Q15361 905 aaPredicted RBP18.52■□□□□ 0.56
LSM5-207ENST00000410044 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 SKAP1Q86WV1 359 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 ZGPATQ8N5A5 531 aaKnown RBP18.52■□□□□ 0.56
LSM5-207ENST00000410044 GMLQ99445 158 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 SNRKQ9NRH2 765 aa18.52■□□□□ 0.56
LSM5-207ENST00000410044 MYO3BQ8WXR4 1341 aa18.51■□□□□ 0.55
LSM5-207ENST00000410044 RAD17O75943 681 aa18.51■□□□□ 0.55
LSM5-207ENST00000410044 CHAF1AQ13111 956 aaPredicted RBP18.51■□□□□ 0.55
LSM5-207ENST00000410044 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
LSM5-207ENST00000410044 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
LSM5-207ENST00000410044 PAG1Q9NWQ8 432 aa18.51■□□□□ 0.55
LSM5-207ENST00000410044 TIAM2Q8IVF5 1701 aa18.51■□□□□ 0.55
LSM5-207ENST00000410044 RGS3P49796 1198 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 MMP14P50281 582 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
LSM5-207ENST00000410044 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
LSM5-207ENST00000410044 CERS5Q8N5B7 392 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 EVI5LQ96CN4 794 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 ANTXR1Q9H6X2 564 aa18.5■□□□□ 0.55
LSM5-207ENST00000410044 MYO5AQ9Y4I1 1855 aaKnown RBP18.5■□□□□ 0.55
LSM5-207ENST00000410044 DOCK2Q92608 1830 aa18.49■□□□□ 0.55
LSM5-207ENST00000410044 GSPT1P15170 499 aaKnown RBP18.49■□□□□ 0.55
LSM5-207ENST00000410044 RPS12P25398 132 aaKnown RBP18.49■□□□□ 0.55
LSM5-207ENST00000410044 GPC2Q8N158 579 aa18.49■□□□□ 0.55
LSM5-207ENST00000410044 DNAJC2Q99543 621 aaKnown RBP18.49■□□□□ 0.55
LSM5-207ENST00000410044 PIH1D3Q9NQM4 214 aaKnown RBP18.49■□□□□ 0.55
LSM5-207ENST00000410044 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
LSM5-207ENST00000410044 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
LSM5-207ENST00000410044 GOLIM4O00461 696 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 BMP2KLQ5H9B9 411 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 DPF2Q92785 391 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
LSM5-207ENST00000410044 JAG2Q9Y219 1238 aa18.48■□□□□ 0.55
LSM5-207ENST00000410044 GRIK5Q16478 980 aa18.47■□□□□ 0.55
LSM5-207ENST00000410044 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
LSM5-207ENST00000410044 ABCF2Q9UG63 623 aa18.47■□□□□ 0.55
LSM5-207ENST00000410044 GLTPD2A6NH11 291 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
LSM5-207ENST00000410044 SDSP20132 328 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 PRDX5P30044 214 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 HDLBPQ00341 1268 aaKnown RBP18.46■□□□□ 0.55
LSM5-207ENST00000410044 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 LRP2BPQ9P2M1 347 aa18.46■□□□□ 0.55
LSM5-207ENST00000410044 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
LSM5-207ENST00000410044 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
LSM5-207ENST00000410044 NSUN4Q96CB9 384 aaKnown RBP18.45■□□□□ 0.54
LSM5-207ENST00000410044 FAM163AQ96GL9 167 aaPredicted RBP18.45■□□□□ 0.54
LSM5-207ENST00000410044 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
LSM5-207ENST00000410044 MYH7P12883 1935 aa18.45■□□□□ 0.54
LSM5-207ENST00000410044 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
LSM5-207ENST00000410044 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms