RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 NFKBIEO00221 500 aa15.26■□□□□ 0.03
PMS1-204ENST00000409823 CWC27Q6UX04 472 aaKnown RBP15.26■□□□□ 0.03
PMS1-204ENST00000409823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.26■□□□□ 0.03
PMS1-204ENST00000409823 ARAP2Q8WZ64 1704 aa15.26■□□□□ 0.03
PMS1-204ENST00000409823 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
PMS1-204ENST00000409823 TDRD7Q8NHU6 1098 aaKnown RBP15.26■□□□□ 0.03
PMS1-204ENST00000409823 MXD3Q9BW11 206 aa15.26■□□□□ 0.03
PMS1-204ENST00000409823 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
PMS1-204ENST00000409823 BRCA1P38398 1863 aaKnown RBP15.26■□□□□ 0.03
PMS1-204ENST00000409823 CDC45O75419 566 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
PMS1-204ENST00000409823 GTF2IP78347 998 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 IL25Q9H293 177 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 PSMD1Q99460 953 aa15.25■□□□□ 0.03
PMS1-204ENST00000409823 ECE2O60344 883 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 CHMLP26374 656 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 KIAA2012Q0VF49 1180 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 LRP2BPQ9P2M1 347 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 IL1R1P14778 569 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 GRIK5Q16478 980 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
PMS1-204ENST00000409823 AKAP11Q9UKA4 1901 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 PRDX5P30044 214 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 DIAPH3Q9NSV4 1193 aa15.24■□□□□ 0.03
PMS1-204ENST00000409823 PRELPP51888 382 aa15.23■□□□□ 0.03
PMS1-204ENST00000409823 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
PMS1-204ENST00000409823 BACH2Q9BYV9 841 aa15.23■□□□□ 0.03
PMS1-204ENST00000409823 RAI14Q9P0K7 980 aa15.23■□□□□ 0.03
PMS1-204ENST00000409823 TTLL5Q6EMB2 1281 aa15.23■□□□□ 0.03
PMS1-204ENST00000409823 A0A0D9SFI3 127 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
PMS1-204ENST00000409823 MFAP1P55081 439 aaKnown RBP15.22■□□□□ 0.03
PMS1-204ENST00000409823 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
PMS1-204ENST00000409823 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
PMS1-204ENST00000409823 SEMA3EO15041 775 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 RAD17O75943 681 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
PMS1-204ENST00000409823 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 MFSD14BQ5SR56 506 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 MAGEB6Q8N7X4 407 aa15.22■□□□□ 0.03
PMS1-204ENST00000409823 COL4A5P29400 1685 aa15.21■□□□□ 0.03
PMS1-204ENST00000409823 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
PMS1-204ENST00000409823 GPR162Q16538 588 aa15.21■□□□□ 0.03
PMS1-204ENST00000409823 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
PMS1-204ENST00000409823 PODNQ7Z5L7 613 aa15.21■□□□□ 0.03
PMS1-204ENST00000409823 CHD4Q14839 1912 aa15.2■□□□□ 0.02
PMS1-204ENST00000409823 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
PMS1-204ENST00000409823 ZNF532Q9HCE3 1301 aa15.2■□□□□ 0.02
PMS1-204ENST00000409823 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
PMS1-204ENST00000409823 PDE6AP16499 860 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 CERS5Q8N5B7 392 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 ZNF384Q8TF68 577 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.19■□□□□ 0.02
PMS1-204ENST00000409823 MYO5AQ9Y4I1 1855 aaKnown RBP15.19■□□□□ 0.02
PMS1-204ENST00000409823 MECOMQ03112 1051 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 DIXDC1Q155Q3 683 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 ADGRA1Q86SQ6 560 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
PMS1-204ENST00000409823 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 MIGA1Q8NAN2 632 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 JDP2Q8WYK2 163 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 PUS7LQ9H0K6 701 aaKnown RBP15.19■□□□□ 0.02
PMS1-204ENST00000409823 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
PMS1-204ENST00000409823 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
PMS1-204ENST00000409823 ADD2P35612 726 aa15.18■□□□□ 0.02
PMS1-204ENST00000409823 M0R2C6 588 aa15.18■□□□□ 0.02
PMS1-204ENST00000409823 DZIP1Q86YF9 867 aaKnown RBP15.18■□□□□ 0.02
PMS1-204ENST00000409823 KIAA0825Q8IV33 1275 aa15.18■□□□□ 0.02
PMS1-204ENST00000409823 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
PMS1-204ENST00000409823 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
PMS1-204ENST00000409823 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 CYP7A1P22680 504 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
PMS1-204ENST00000409823 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 SCNN1DP51172 638 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 NAA16Q6N069 864 aaPredicted RBP15.17■□□□□ 0.02
PMS1-204ENST00000409823 ZNRF3Q9ULT6 936 aa15.17■□□□□ 0.02
PMS1-204ENST00000409823 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 HIP1O00291 1037 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 PSMD14O00487 310 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 SGSM2O43147 1006 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 MYH13Q9UKX3 1938 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms