RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 JAK2O60674 1132 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 N4BP1O75113 896 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 WDHD1O75717 1129 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 SLC3A2P08195 630 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 HNRNPH1P31943 449 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 CLASRPQ8N2M8 674 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 SMARCC2Q8TAQ2 1214 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 COG3Q96JB2 828 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 CDC23Q9UJX2 597 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 ABCC6O95255 1503 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 EBAG9O00559 213 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 C21orf2O43822 256 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 MCM3P25205 808 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 HSP90AB3PQ58FF7 597 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 TMEM139Q8IV31 216 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 GIMAP7Q8NHV1 300 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 USP28Q96RU2 1077 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 DLC1Q96QB1 1528 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 MYH15Q9Y2K3 1946 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 HSP90B1P14625 803 aaKnown RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 LMOD1P29536 600 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 NBPF6Q5VWK0 638 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 GBP6Q6ZN66 633 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 EP400NLQ6ZTU2 488 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 NBPF4Q96M43 638 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
R3HDM1-202ENST00000409478 RNF40O75150 1001 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 NPHP4O75161 1426 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 PIP4K2BP78356 416 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 MYL5Q02045 173 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 SULT6B1Q6IMI4 303 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 CNPY4Q8N129 248 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 KCNG4Q8TDN1 519 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 ATXN2Q99700 1313 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 RBM28Q9NW13 759 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 FAM208AQ9UK61 1670 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 PPP1R12AO14974 1030 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 KIF5CO60282 957 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 SHOX2O60902 331 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 CCDC175P0C221 793 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 DDR1Q08345 913 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 OS9Q13438 667 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 MAP9Q49MG5 647 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 PNKPQ96T60 521 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 RTEL1Q9NZ71 1219 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 PCDHA7Q9UN72 937 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 JCADQ9P266 1359 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 NUTM2FA1L443 756 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 EXOC5O00471 708 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 KIF3CO14782 793 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 NUTM2GQ5VZR2 741 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 KCNG1Q9UIX4 513 aa6.69□□□□□ -1.34
R3HDM1-202ENST00000409478 SBNO1A3KN83 1393 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 ANKRD65E5RJM6 399 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 NDUFA8P51970 172 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 NMIQ13287 307 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 LRCH2Q5VUJ6 765 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 KAT2BQ92831 832 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 SMARCC1Q92922 1105 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 GNL3LQ9NVN8 582 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 RAI14Q9P0K7 980 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CTAGE15A4D2H0 777 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 TMCO5BA8MYB1 307 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CTAGE8P0CG41 777 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 INPP5BP32019 993 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 LIG3P49916 1009 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 TBX2Q13207 712 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 NEDD9Q14511 834 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 WHAMMP3Q1A5X7 153 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CTAGE6Q86UF2 777 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CTAGE4Q8IX94 777 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CABS1Q96KC9 395 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 TCEANC2Q96MN5 208 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 FAM169AQ9Y6X4 670 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 POGZQ7Z3K3 1410 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 A0A1B0GVL5 298 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 PFKFB2O60825 505 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 PHACTR2O75167 634 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 RDXP35241 583 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 KIF4BQ2VIQ3 1234 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 OLFM4Q6UX06 510 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 TOGARAM2Q6ZUX3 1019 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 SPATS2Q86XZ4 545 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 PRPF38AQ8NAV1 312 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 NEK1Q96PY6 1258 aa6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 NAA15Q9BXJ9 866 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 FTOQ9C0B1 505 aaKnown RBP eCLIP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 PUF60Q9UHX1 559 aaKnown RBP6.68□□□□□ -1.34
R3HDM1-202ENST00000409478 CCDC189A1A4V9 331 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 A6NNZ2 444 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 YEATS4O95619 227 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 ATP1A3P13637 1013 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms