RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MMP14P50281 582 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 SCARF1Q14162 830 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 MVPQ14764 893 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 ATP2B3Q16720 1220 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 CERS5Q8N5B7 392 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 DNAJC5GQ8N7S2 189 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
PDLIM2-206ENST00000409141 FAM205AQ6ZU69 1335 aa22.25■■□□□ 1.15
PDLIM2-206ENST00000409141 FKBP1AP62942 108 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-206ENST00000409141 G3BP1Q13283 466 aaKnown RBP eCLIP22.25■■□□□ 1.15
PDLIM2-206ENST00000409141 USP48Q86UV5 1035 aa22.25■■□□□ 1.15
PDLIM2-206ENST00000409141 DDX19BQ9UMR2 479 aa22.24■■□□□ 1.15
PDLIM2-206ENST00000409141 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 TFCP2Q12800 502 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 POLA2Q14181 598 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 KRT26Q7Z3Y9 468 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 GGA3Q9NZ52 723 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 CEP350Q5VT06 3117 aa22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 ASTN2O75129 1339 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-206ENST00000409141 CHAF1AQ13111 956 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 MFSD14BQ5SR56 506 aa22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 ZNF646O15015 1829 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 ANGEL2Q5VTE6 544 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
PDLIM2-206ENST00000409141 TIMM10P62072 90 aa22.21■■□□□ 1.15
PDLIM2-206ENST00000409141 SULF1Q8IWU6 871 aa22.21■■□□□ 1.15
PDLIM2-206ENST00000409141 KLRG1Q96E93 195 aa22.21■■□□□ 1.15
PDLIM2-206ENST00000409141 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-206ENST00000409141 WNT10BO00744 389 aa22.2■■□□□ 1.14
PDLIM2-206ENST00000409141 C20orf194Q5TEA3 1177 aa22.2■■□□□ 1.14
PDLIM2-206ENST00000409141 CST9Q5W186 159 aa22.2■■□□□ 1.14
PDLIM2-206ENST00000409141 CEP85Q6P2H3 762 aa22.2■■□□□ 1.14
PDLIM2-206ENST00000409141 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-206ENST00000409141 ADM5C9JUS6 153 aa22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 SURF6O75683 361 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 CELF2O95319 508 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 OS9Q13438 667 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 DLGAP5Q15398 846 aa22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 DLK2Q6UY11 383 aa22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 TBC1D22AQ8WUA7 517 aa22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 ZNF408Q9H9D4 720 aa22.19■■□□□ 1.14
PDLIM2-206ENST00000409141 A0A1B0GUL7 405 aa22.18■■□□□ 1.14
PDLIM2-206ENST00000409141 NEUROD6Q96NK8 337 aa22.18■■□□□ 1.14
PDLIM2-206ENST00000409141 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
PDLIM2-206ENST00000409141 MKRN1Q9UHC7 482 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-206ENST00000409141 ABT1Q9ULW3 272 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-206ENST00000409141 ADORA1P30542 326 aa22.17■■□□□ 1.14
PDLIM2-206ENST00000409141 TTF2Q9UNY4 1162 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-206ENST00000409141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.17■■□□□ 1.14
PDLIM2-206ENST00000409141 PITPNM2Q9BZ72 1349 aa22.17■■□□□ 1.14
PDLIM2-206ENST00000409141 PHKA1P46020 1223 aa22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 RBM5P52756 815 aaKnown RBP eCLIP22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 CFAP100Q494V2 611 aa22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 CCDC102BQ68D86 513 aa22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 MTMR14Q8NCE2 650 aa22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 XAGE2Q96GT9 111 aa22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 POLR2AP24928 1970 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-206ENST00000409141 ZBED3Q96IU2 234 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 RPAP2Q8IXW5 612 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 WDR66Q8TBY9 1149 aa22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 SCAF8Q9UPN6 1271 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 PCDHAC2Q9Y5I4 1007 aa22.15■■□□□ 1.14
PDLIM2-206ENST00000409141 GRIK5Q16478 980 aa22.14■■□□□ 1.13
PDLIM2-206ENST00000409141 DEFB115Q30KQ5 88 aa22.14■■□□□ 1.13
PDLIM2-206ENST00000409141 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
PDLIM2-206ENST00000409141 SERPINA10Q9UK55 444 aa22.14■■□□□ 1.13
PDLIM2-206ENST00000409141 SPDYE2BA6NHP3 402 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 SEMA3EO15041 775 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 MYO1BO43795 1136 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 SPDYE6P0CI01 402 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 CDCA5Q96FF9 252 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 PRMT6Q96LA8 375 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 DENND2AQ9ULE3 1009 aa22.13■■□□□ 1.13
PDLIM2-206ENST00000409141 TRPM7Q96QT4 1865 aa22.12■■□□□ 1.13
PDLIM2-206ENST00000409141 CNTNAP1P78357 1384 aa22.12■■□□□ 1.13
PDLIM2-206ENST00000409141 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
PDLIM2-206ENST00000409141 GPR108Q9NPR9 543 aa22.12■■□□□ 1.13
PDLIM2-206ENST00000409141 TLL2Q9Y6L7 1015 aa22.12■■□□□ 1.13
PDLIM2-206ENST00000409141 HMMRO75330 724 aa22.11■■□□□ 1.13
PDLIM2-206ENST00000409141 APOBEC3FQ8IUX4 373 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-206ENST00000409141 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
PDLIM2-206ENST00000409141 CRKP46108 304 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 TNNI3KQ59H18 835 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 SAPCD2Q86UD0 394 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 C2orf69Q8N8R5 385 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 JMYQ8N9B5 988 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 FPGT-TNNI3KV9GXZ4 949 aa22.1■■□□□ 1.13
PDLIM2-206ENST00000409141 CLRN2A0PK11 232 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 VEGFBP49765 207 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 HDLBPQ00341 1268 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 RASGRF1Q13972 1273 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 PRAMEF18Q5VWM3 479 aa22.09■■□□□ 1.13
PDLIM2-206ENST00000409141 PAXIP1Q6ZW49 1069 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms