RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CARMIL3Q8ND23 1372 aa19.77■□□□□ 0.75
NUP50-203ENST00000407019 PRC1O43663 620 aa19.76■□□□□ 0.75
NUP50-203ENST00000407019 ADD2P35612 726 aa19.76■□□□□ 0.75
NUP50-203ENST00000407019 TERF1P54274 439 aa19.76■□□□□ 0.75
NUP50-203ENST00000407019 NCOA7Q8NI08 942 aa19.76■□□□□ 0.75
NUP50-203ENST00000407019 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
NUP50-203ENST00000407019 ZNF213O14771 459 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 PDE8BO95263 885 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
NUP50-203ENST00000407019 GPHNQ9NQX3 736 aaPredicted RBP19.75■□□□□ 0.75
NUP50-203ENST00000407019 RCOR1Q9UKL0 485 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 TBC1D2BQ9UPU7 963 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 ATRNO75882 1429 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 AP5Z1O43299 807 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 CEBPZQ03701 1054 aaKnown RBP19.75■□□□□ 0.75
NUP50-203ENST00000407019 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 WDR19Q8NEZ3 1342 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 LRP5O75197 1615 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 COL16A1Q07092 1604 aaPredicted RBP19.75■□□□□ 0.75
NUP50-203ENST00000407019 NUP98P52948 1817 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
NUP50-203ENST00000407019 ZNF34Q8IZ26 560 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 MPNDQ8N594 471 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 AKAP11Q9UKA4 1901 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 ANO6Q4KMQ2 910 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 SLC9C2Q5TAH2 1124 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 SASS6Q6UVJ0 657 aa19.74■□□□□ 0.75
NUP50-203ENST00000407019 PIH1D3Q9NQM4 214 aaKnown RBP19.74■□□□□ 0.75
NUP50-203ENST00000407019 R3HCC1Q9Y3T6 440 aaKnown RBP19.74■□□□□ 0.75
NUP50-203ENST00000407019 KLF18A0A0U1RQI7 1052 aa19.73■□□□□ 0.75
NUP50-203ENST00000407019 DHX16O60231 1041 aaKnown RBP19.73■□□□□ 0.75
NUP50-203ENST00000407019 UQCRFS1P1P0C7P4 283 aa19.73■□□□□ 0.75
NUP50-203ENST00000407019 FDPSP14324 419 aaKnown RBP19.73■□□□□ 0.75
NUP50-203ENST00000407019 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
NUP50-203ENST00000407019 GUCY1B3Q02153 619 aa19.73■□□□□ 0.75
NUP50-203ENST00000407019 USP28Q96RU2 1077 aa19.73■□□□□ 0.75
NUP50-203ENST00000407019 COL22A1Q8NFW1 1626 aaPredicted RBP19.73■□□□□ 0.75
NUP50-203ENST00000407019 MROH5Q6ZUA9 1318 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 GOLGA8BA8MQT2 603 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 PPFIA3O75145 1194 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 ANTXR2P58335 489 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 UBE3CQ15386 1083 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
NUP50-203ENST00000407019 CCDC102BQ68D86 513 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 ZNF830Q96NB3 372 aaPredicted RBP19.72■□□□□ 0.75
NUP50-203ENST00000407019 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
NUP50-203ENST00000407019 CBX8Q9HC52 389 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 DDX60Q8IY21 1712 aaKnown RBP19.72■□□□□ 0.75
NUP50-203ENST00000407019 PHKA1P46020 1223 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 LUZP1Q86V48 1076 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 AK7Q96M32 723 aa19.72■□□□□ 0.75
NUP50-203ENST00000407019 IDH1O75874 414 aaKnown RBP19.71■□□□□ 0.75
NUP50-203ENST00000407019 CCAR1Q8IX12 1150 aaKnown RBP19.71■□□□□ 0.75
NUP50-203ENST00000407019 PIBF1Q8WXW3 757 aa19.71■□□□□ 0.75
NUP50-203ENST00000407019 LPIN2Q92539 896 aa19.71■□□□□ 0.75
NUP50-203ENST00000407019 TTC12Q9H892 705 aaPredicted RBP19.71■□□□□ 0.75
NUP50-203ENST00000407019 TPM3P06753 285 aa19.71■□□□□ 0.75
NUP50-203ENST00000407019 TRDNQ13061 729 aa19.71■□□□□ 0.75
NUP50-203ENST00000407019 ILDR1Q86SU0 546 aaPredicted RBP19.71■□□□□ 0.75
NUP50-203ENST00000407019 HPS5Q9UPZ3 1129 aa19.71■□□□□ 0.75
NUP50-203ENST00000407019 ZNF532Q9HCE3 1301 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 GOLGA6L6A8MZA4 724 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 FGFR2P21802 821 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 CCDC73Q6ZRK6 1079 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 ARAP2Q8WZ64 1704 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 SLIT2O94813 1529 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 ROBO1Q9Y6N7 1651 aa19.7■□□□□ 0.74
NUP50-203ENST00000407019 AHDC1Q5TGY3 1603 aaPredicted RBP19.69■□□□□ 0.74
NUP50-203ENST00000407019 CTAGE5O15320 804 aa19.69■□□□□ 0.74
NUP50-203ENST00000407019 PDE6AP16499 860 aa19.69■□□□□ 0.74
NUP50-203ENST00000407019 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
NUP50-203ENST00000407019 C8orf76Q96K31 380 aa19.69■□□□□ 0.74
NUP50-203ENST00000407019 CDCA7Q9BWT1 371 aaPredicted RBP19.69■□□□□ 0.74
NUP50-203ENST00000407019 NBPF3Q9H094 633 aa19.69■□□□□ 0.74
NUP50-203ENST00000407019 CPLX1O14810 134 aa19.69■□□□□ 0.74
NUP50-203ENST00000407019 ORC3Q9UBD5 711 aaPredicted RBP19.69■□□□□ 0.74
NUP50-203ENST00000407019 CAVIN2O95810 425 aa19.68■□□□□ 0.74
NUP50-203ENST00000407019 SLC5A1P13866 664 aa19.68■□□□□ 0.74
NUP50-203ENST00000407019 TBC1D10CQ8IV04 446 aa19.68■□□□□ 0.74
NUP50-203ENST00000407019 TDRD7Q8NHU6 1098 aaKnown RBP19.68■□□□□ 0.74
NUP50-203ENST00000407019 GOLPH3LQ9H4A5 285 aa19.68■□□□□ 0.74
NUP50-203ENST00000407019 CCDC87Q9NVE4 849 aa19.68■□□□□ 0.74
NUP50-203ENST00000407019 TCRBV5S4A2TA0A5A2 114 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 APPP05067 770 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 ME1P48163 572 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 ZNF165P49910 485 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 SUSD4Q5VX71 490 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
NUP50-203ENST00000407019 HELBQ8NG08 1087 aaPredicted RBP19.67■□□□□ 0.74
NUP50-203ENST00000407019 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 DNAJC25Q9H1X3 360 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 RTEL1Q9NZ71 1219 aa19.67■□□□□ 0.74
NUP50-203ENST00000407019 KAT6BQ8WYB5 2073 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 FAM160A1Q05DH4 1040 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 RAB11FIP4Q86YS3 637 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 SPC24Q8NBT2 197 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 AIDAQ96BJ3 306 aa19.66■□□□□ 0.74
NUP50-203ENST00000407019 UTP14AQ9BVJ6 771 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms