RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 ZNF397Q8NF99 534 aaPredicted RBP17.15■□□□□ 0.34
ITSN2-203ENST00000406921 DHX58Q96C10 678 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
ITSN2-203ENST00000406921 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 SPTLC2O15270 562 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 USP8P40818 1118 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 GYG1P46976 350 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 TCP10Q12799 353 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
ITSN2-203ENST00000406921 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 KCNG4Q8TDN1 519 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 RAD50Q92878 1312 aa17.15■□□□□ 0.34
ITSN2-203ENST00000406921 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.34
ITSN2-203ENST00000406921 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 EHMT1Q9H9B1 1298 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 KDM5DQ9BY66 1539 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 ZNF532Q9HCE3 1301 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 USPL1Q5W0Q7 1092 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 SMARCC2Q8TAQ2 1214 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
ITSN2-203ENST00000406921 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
ITSN2-203ENST00000406921 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
ITSN2-203ENST00000406921 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 AMPD3Q01432 767 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 MCM7P33993 719 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 PUS3Q9BZE2 481 aaKnown RBP17.13■□□□□ 0.33
ITSN2-203ENST00000406921 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 H0YIN7 160 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 CALM1P0DP23 149 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 CALM2P0DP24 149 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 CALM3P0DP25 149 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 STAT6P42226 847 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 CTSWP56202 376 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 MAPKAPK5Q8IW41 473 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
ITSN2-203ENST00000406921 SP4Q02446 784 aa17.13■□□□□ 0.33
ITSN2-203ENST00000406921 SPA17Q15506 151 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 TRIM37O94972 964 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 RPS6KB1P23443 525 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 PRKG1Q13976 671 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 N4BP3O15049 544 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
ITSN2-203ENST00000406921 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
ITSN2-203ENST00000406921 RRAGBQ5VZM2 374 aa17.12■□□□□ 0.33
ITSN2-203ENST00000406921 ZNF830Q96NB3 372 aaPredicted RBP17.12■□□□□ 0.33
ITSN2-203ENST00000406921 BCAMP50895 628 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 GREM2Q9H772 168 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
ITSN2-203ENST00000406921 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 GTF2IP78347 998 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
ITSN2-203ENST00000406921 C6orf50Q9HD87 102 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
ITSN2-203ENST00000406921 TNNT1P13805 278 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
ITSN2-203ENST00000406921 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
ITSN2-203ENST00000406921 CDR1P51861 262 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITSN2-203ENST00000406921 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
ITSN2-203ENST00000406921 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 ASIC1P78348 528 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 PHKBQ93100 1093 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
ITSN2-203ENST00000406921 UQCRHLA0A096LP55 91 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 UQCRHP07919 91 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 STX17P56962 302 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 ANGEL1Q9UNK9 670 aaKnown RBP17.1■□□□□ 0.33
ITSN2-203ENST00000406921 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
ITSN2-203ENST00000406921 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
ITSN2-203ENST00000406921 KIF20AO95235 890 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 RDXP35241 583 aaKnown RBP17.09■□□□□ 0.33
ITSN2-203ENST00000406921 ZBTB38Q8NAP3 1195 aaPredicted RBP17.09■□□□□ 0.33
ITSN2-203ENST00000406921 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 FAM193AP78312 1265 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 EXOC1Q9NV70 894 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 FCHSD1Q86WN1 690 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 TAF4BQ92750 862 aa17.09■□□□□ 0.33
ITSN2-203ENST00000406921 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms