RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 IFFO1Q0D2I5 559 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 PDCD2Q16342 344 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-205ENST00000406768 WHAMMP3Q1A5X7 153 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 LRRC23Q53EV4 343 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-205ENST00000406768 E4F1Q66K89 784 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-205ENST00000406768 TBC1D22AQ8WUA7 517 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 STAG1Q8WVM7 1258 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 FUT8Q9BYC5 575 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 MRFAP1Q9Y605 127 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 IFT88Q13099 833 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 LRRC31Q6UY01 552 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-205ENST00000406768 KLC4Q9NSK0 619 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 FAM135AQ9P2D6 1515 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 UNC13BO14795 1591 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 VAMP4O75379 141 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 TAX1BP1Q86VP1 789 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 LMNTD2Q8IXW0 634 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 TTC36A6NLP5 189 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 ENO4A6NNW6 628 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 MIPOL1Q8TD10 442 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 PZPP20742 1482 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 INO80Q9ULG1 1556 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-205ENST00000406768 CD109Q6YHK3 1445 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 GOLGA8KD6RF30 607 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.762e-8■■■■□ 24.4
PSEN1-205ENST00000406768 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-205ENST00000406768 ZNF518AQ6AHZ1 1483 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 E7EVH7 732 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 PCK1P35558 622 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
PSEN1-205ENST00000406768 RNF168Q8IYW5 571 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-205ENST00000406768 AKR1B15C9JRZ8 316 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 YEATS4O95619 227 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 MTX1Q13505 466 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 KLHL10Q6JEL2 608 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 ADGRL1O94910 1474 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 A0A1B0GVL5 298 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 RANBP1P43487 201 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 SAFBQ15424 915 aaKnown RBP eCLIP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 PPP1R7Q15435 360 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 RUFY3Q7L099 469 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 SGSM3Q96HU1 749 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 GUCA1BQ9UMX6 200 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 H3BQF6 201 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 SYKP43405 635 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 VAV2P52735 878 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 KCNG4Q8TDN1 519 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 FUCA2Q9BTY2 467 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 CD248Q9HCU0 757 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 KIF3BO15066 747 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 CAND2O75155 1236 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 PDE6BP35913 854 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 MXRA7P84157 204 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 HLTFQ14527 1009 aaKnown RBP eCLIP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 ETAA1Q9NY74 926 aa10.28□□□□□ -0.76
PSEN1-205ENST00000406768 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
PSEN1-205ENST00000406768 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 SASH3O75995 380 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 WDR66Q8TBY9 1149 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 CARD14Q9BXL6 1004 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 C9orf78Q9NZ63 289 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 LRRD1A4D1F6 860 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 LUC7L3O95232 432 aaKnown RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 HPDP32754 393 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 TSC22D3Q99576 134 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 TRIM4Q9C037 500 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 ACTR5Q9H9F9 607 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 ZFYVE16Q7Z3T8 1539 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 STX10O60499 249 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 LACTBP83111 547 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 CCDC102BQ68D86 513 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 TSPYL6Q8N831 410 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 NAA15Q9BXJ9 866 aaKnown RBP10.27□□□□□ -0.77
PSEN1-205ENST00000406768 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
PSEN1-205ENST00000406768 SCAF11Q99590 1463 aaKnown RBP10.26□□□□□ -0.77
PSEN1-205ENST00000406768 SSH2Q76I76 1423 aa10.26□□□□□ -0.77
PSEN1-205ENST00000406768 ADKP55263 362 aaKnown RBP10.26□□□□□ -0.77
PSEN1-205ENST00000406768 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
PSEN1-205ENST00000406768 KIF9Q9HAQ2 790 aa10.26□□□□□ -0.77
PSEN1-205ENST00000406768 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
PSEN1-205ENST00000406768 AKAP2Q9Y2D5 859 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms