RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 VEZTQ9HBM0 779 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC110Q8TBZ0 833 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 STIM2Q9P246 746 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 ATP5DP30049 168 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 MCM7P33993 719 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC25Q86WR0 208 aa13.58□□□□□ -0.24
SMCR8-201ENST00000406438 TUBB4AP04350 444 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 ERCC6LQ2NKX8 1250 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 HAUS2Q9NVX0 235 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 RBM28Q9NW13 759 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 CPLX4Q7Z7G2 160 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 PRPF31Q8WWY3 499 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 RPL13P26373 211 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 SLC9C2Q5TAH2 1124 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 KIFC2Q96AC6 838 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 ZC3H12CQ9C0D7 883 aaKnown RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 E7EVH7 732 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 GABPB2Q8TAK5 448 aaPredicted RBP13.57□□□□□ -0.24
SMCR8-201ENST00000406438 DHX58Q96C10 678 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
SMCR8-201ENST00000406438 KRT5P13647 590 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 VAV2P52735 878 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 RBM8AQ9Y5S9 174 aaKnown RBP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 BRF1Q92994 677 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 EPB41P11171 864 aaKnown RBP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 TNNI2P48788 182 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 INF2Q27J81 1249 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 DCAF17Q5H9S7 520 aaPredicted RBP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
SMCR8-201ENST00000406438 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 CAPZA3Q96KX2 299 aa13.56□□□□□ -0.24
SMCR8-201ENST00000406438 SDSP20132 328 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SEL1L2Q5TEA6 688 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 STX10O60499 249 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SMTNP53814 917 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SETDB1Q15047 1291 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 VPS52Q8N1B4 723 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 KCNK9Q9NPC2 374 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 PFDN4Q9NQP4 134 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SPTLC2O15270 562 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 BACH1O14867 736 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 CCDC26Q8TAB7 109 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SAMD15Q9P1V8 674 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 BIN2Q9UBW5 565 aaPredicted RBP13.55□□□□□ -0.24
SMCR8-201ENST00000406438 NOS1P29475 1434 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
SMCR8-201ENST00000406438 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 FANCAO15360 1455 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SEPT6Q14141 434 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 RSPH14Q9UHP6 348 aa13.55□□□□□ -0.24
SMCR8-201ENST00000406438 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 SMIM23A6NLE4 172 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 STK10O94804 968 aaKnown RBP13.54□□□□□ -0.24
SMCR8-201ENST00000406438 GTF2A1P52655 376 aaPredicted RBP13.54□□□□□ -0.24
SMCR8-201ENST00000406438 UBLCP1Q8WVY7 318 aaPredicted RBP13.54□□□□□ -0.24
SMCR8-201ENST00000406438 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
SMCR8-201ENST00000406438 SATB1Q01826 763 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 GUCA1BQ9UMX6 200 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
SMCR8-201ENST00000406438 EBAG9O00559 213 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 ZEB2O60315 1214 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
SMCR8-201ENST00000406438 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms