RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 KCNA6P17658 529 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PSME1Q06323 249 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 LINC00301Q8NCQ3 95 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PUF60Q9UHX1 559 aaKnown RBP11.08□□□□□ -0.64
SMC1B-202ENST00000404354 PHACTR2O75167 634 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
SMC1B-202ENST00000404354 CYP2C19P33261 490 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 LMAN1P49257 510 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 MCM6Q14566 821 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 ESCO1Q5FWF5 840 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
SMC1B-202ENST00000404354 ITSN1Q15811 1721 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 MON2Q7Z3U7 1717 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 HSPD1P10809 573 aaKnown RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 ATP5JP18859 108 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 TNNT3P45378 269 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 TPM4P67936 248 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 ARGLU1Q9NWB6 273 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 CARMIL3Q8ND23 1372 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 A0A0U1RQJ8 604 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 COBLO75128 1261 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 PDE4CQ08493 712 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 RAD51AP2Q09MP3 1159 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 NCAPHQ15003 741 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 PHKBQ93100 1093 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 L2HGDHQ9H9P8 463 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 LZTFL1Q9NQ48 299 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 ZC3H6P61129 1189 aaKnown RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.07□□□□□ -0.64
SMC1B-202ENST00000404354 LCMT1Q9UIC8 334 aa11.07□□□□□ -0.64
SMC1B-202ENST00000404354 MTF1Q14872 753 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 PI16Q6UXB8 463 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 SUGCTQ9HAC7 445 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 PDIA4P13667 645 aaKnown RBP11.06□□□□□ -0.64
SMC1B-202ENST00000404354 SYKP43405 635 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 CCDC93Q567U6 631 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 DDX21Q9NR30 783 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMC1B-202ENST00000404354 FAM208AQ9UK61 1670 aaKnown RBP11.06□□□□□ -0.64
SMC1B-202ENST00000404354 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
SMC1B-202ENST00000404354 SMC1AQ14683 1233 aaKnown RBP11.05□□□□□ -0.64
SMC1B-202ENST00000404354 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 TRIM65Q6PJ69 517 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 M0R2C6 588 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
SMC1B-202ENST00000404354 NLRP12P59046 1061 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 PDIA6Q15084 440 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 IP6K1Q92551 441 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 PLEKHA4Q9H4M7 779 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 CDC27P30260 824 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 CCDC191Q8NCU4 936 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
SMC1B-202ENST00000404354 HDAC5Q9UQL6 1122 aa11.05□□□□□ -0.64
SMC1B-202ENST00000404354 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
SMC1B-202ENST00000404354 APPP05067 770 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 CASQ1P31415 396 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 HINFPQ9BQA5 517 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PUS3Q9BZE2 481 aaKnown RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 FAM53CQ9NYF3 392 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PRC1O43663 620 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 TADA3O75528 432 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PDE4BQ07343 736 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 ANO1Q5XXA6 986 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 KLHL10Q6JEL2 608 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 REXO1L1PQ8IX06 675 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
SMC1B-202ENST00000404354 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 DHX58Q96C10 678 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 IMPACTQ9P2X3 320 aa11.04□□□□□ -0.64
SMC1B-202ENST00000404354 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms