RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF157P51786 506 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 FAAP100Q0VG06 881 aa8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 COL9A3Q14050 684 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 RRAGCQ9HB90 399 aa8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 IGSF5Q9NSI5 407 aa8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 USP31Q70CQ4 1352 aa8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 ARHGEF15O94989 841 aa8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 XRCC5P13010 732 aaKnown RBP8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 DGKGP49619 791 aa8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 C9orf131Q5VYM1 1079 aa8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 HGSNATQ68CP4 663 aa8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
HMGB3P19-201ENST00000403971 LINC01387J3KSC0 135 aa8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 SCAMP3O14828 347 aaKnown RBP8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 NID1P14543 1247 aa8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 TCF3P15923 654 aa8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 SNRPNP63162 240 aaKnown RBP8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 HDLBPQ00341 1268 aaKnown RBP8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 PCDH1Q08174 1060 aa8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 ZNF423Q2M1K9 1284 aa8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P19-201ENST00000403971 FANCCQ00597 558 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 PRDM6Q9NQX0 595 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
HMGB3P19-201ENST00000403971 FAM177BA6PVY3 158 aa8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 CELA3AP09093 270 aa8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 ZNF76P36508 570 aa8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 ENAMQ9NRM1 1142 aa8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 PPM1HQ9ULR3 514 aa8.15□□□□□ -1.1
HMGB3P19-201ENST00000403971 F6X3S4 739 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 H3BRJ5 948 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 SOX1O00570 391 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 ST13P50502 369 aaKnown RBP8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 CABP4P57796 275 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 IKBKEQ14164 716 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 CCDC85BQ15834 202 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
HMGB3P19-201ENST00000403971 ENC1O14682 589 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 PAGE1O75459 146 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 RPS26P11Q5JNZ5 115 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 LINC00114Q6XXX2 140 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 CACTIN-AS1Q8N1I8 211 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 RNF34Q969K3 372 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 NECAB3Q96P71 396 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
HMGB3P19-201ENST00000403971 B3GALT4O96024 378 aa8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 RANGAP1P46060 587 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 ANKRD24Q8TF21 1146 aa8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 COPRSQ9NQ92 184 aa8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 METTL5Q9NRN9 209 aaKnown RBP8.12□□□□□ -1.11
HMGB3P19-201ENST00000403971 FSCN2O14926 492 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 STK35Q8TDR2 534 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 CEP44Q9C0F1 390 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 GGT7Q9UJ14 662 aa8.11□□□□□ -1.11
HMGB3P19-201ENST00000403971 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 GSTM4Q03013 218 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 RASIP1Q5U651 963 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 KLHDC7BQ96G42 594 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 NOC4LQ9BVI4 516 aaKnown RBP8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 PCDHGB7Q9Y5F8 929 aa8.1□□□□□ -1.11
HMGB3P19-201ENST00000403971 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 TM4SF5O14894 197 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 PIP4K2BP78356 416 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 RAD51AP2Q09MP3 1159 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 ERMP1Q7Z2K6 904 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 ADAMTS8Q9UP79 889 aa8.09□□□□□ -1.11
HMGB3P19-201ENST00000403971 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 DDX3YO15523 660 aaKnown RBP8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 ERCC5P28715 1186 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 MKL2Q9ULH7 1088 aa8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 TLR6Q9Y2C9 796 aa8.08□□□□□ -1.12
HMGB3P19-201ENST00000403971 GNB5O14775 395 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms