RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ADAMTS1Q9UHI8 967 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 ELOA3CA0A087WX78 387 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 ELOA3DA6NLF2 546 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 XRCC5P13010 732 aaKnown RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 EPHA1P21709 976 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 LIG3P49916 1009 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 PCDH1Q08174 1060 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 PCSK7Q16549 785 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 ELOA3BQ3SY89 546 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 ELOA3Q8NG57 546 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 BSNDQ8WZ55 320 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 ACDQ96AP0 544 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 NECAB3Q96P71 396 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 JPH1Q9HDC5 661 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 AVENQ9NQS1 362 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 PPM1HQ9ULR3 514 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 SOX13Q9UN79 622 aa6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 NSFL1CQ9UNZ2 370 aaKnown RBP6.14□□□□□ -1.43
HMGB1P17-201ENST00000403495 ADAMTS2O95450 1211 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 ALBP02768 609 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 PF4P02776 101 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 VSIG8P0DPA2 414 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 PTPRAP18433 802 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 TTBK2Q6IQ55 1244 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 SV2BQ7L1I2 683 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 RELL1Q8IUW5 271 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 PHC3Q8NDX5 983 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 DHX38Q92620 1227 aaKnown RBP6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 DRC1Q96MC2 740 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 TANGO6Q9C0B7 1094 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 CLEC4MQ9H2X3 399 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 PCDHB5Q9Y5E4 795 aa6.13□□□□□ -1.43
HMGB1P17-201ENST00000403495 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 TFE3P19532 575 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 NFX1Q12986 1120 aaKnown RBP6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 GRIK5Q16478 980 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 PCNX4Q63HM2 1172 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 FBXL19Q6PCT2 694 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 MPRIPQ6WCQ1 1025 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 IL22RA1Q8N6P7 574 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 GRIN3AQ8TCU5 1115 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 SLC7A3Q8WY07 619 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 TMEM74Q96NL1 305 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 SPON2Q9BUD6 331 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 PRKAG2Q9UGJ0 569 aa6.12□□□□□ -1.43
HMGB1P17-201ENST00000403495 SHISA8B8ZZ34 492 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 LINC01387J3KSC0 135 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 ESRRAP11474 423 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 EPXP11678 715 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 CDC27P30260 824 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 EIF4A3P38919 411 aaKnown RBP6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 SLCO4C1Q6ZQN7 724 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 NPAS3Q8IXF0 933 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 GOLGA6L1Q8N7Z2 621 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 EAF1Q96JC9 268 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 RHOVQ96L33 236 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 ZC3H12CQ9C0D7 883 aaKnown RBP6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 CEP44Q9C0F1 390 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 ADAM19Q9H013 955 aa6.11□□□□□ -1.43
HMGB1P17-201ENST00000403495 M0R082 166 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 SOX1O00570 391 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 TLR3O15455 904 aaKnown RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 B3GALT4O96024 378 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 GARTP22102 1010 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 ALAS2P22557 587 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 BAG6P46379 1132 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 SRSF11Q05519 484 aaKnown RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 SEPT6Q14141 434 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 IKBKEQ14164 716 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 BNC2Q6ZN30 1099 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 C20orf204Q6ZNR8 217 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 KIAA0825Q8IV33 1275 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 SULF2Q8IWU5 870 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 GOLM1Q8NBJ4 401 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 GALNT6Q8NCL4 622 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 FBXO27Q8NI29 283 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 ZNF417Q8TAU3 575 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 SLC16A10Q8TF71 515 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 GPRASP2Q96D09 838 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 ZNF587Q96SQ5 575 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 DNAJC2Q99543 621 aaKnown RBP6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 CBX8Q9HC52 389 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 TMEM39AQ9NV64 488 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 FRRS1LQ9P0K9 344 aa6.1□□□□□ -1.43
HMGB1P17-201ENST00000403495 ECEL1O95672 775 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 BMP6P22004 513 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 AFF1P51825 1210 aaKnown RBP6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 RPS26P11Q5JNZ5 115 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 SNAP47Q5SQN1 464 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 CHSY3Q70JA7 882 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms