RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 TREML4Q6UXN2 200 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 MRS2Q9HD23 443 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 AXIN2Q9Y2T1 843 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 SLC45A1Q9Y2W3 748 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 RABGAP1Q9Y3P9 1069 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 ROBO2Q9HCK4 1378 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 COL24A1Q17RW2 1714 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 PPP1R15BQ5SWA1 713 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 HDGFL2Q7Z4V5 671 aaPredicted RBP4.74□□□□□ -1.65
CLHC1-201ENST00000401408 GLYCTKQ8IVS8 523 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 LSM14AQ8ND56 463 aaKnown RBP4.74□□□□□ -1.65
CLHC1-201ENST00000401408 KIF1AQ12756 1690 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 SBF2Q86WG5 1849 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 MAP3K5Q99683 1374 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 A6NJY4 79 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 TSPAN6O43657 245 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 GPR37L1O60883 481 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 MTA2O94776 668 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 P4HBP07237 508 aaKnown RBP4.74□□□□□ -1.65
CLHC1-201ENST00000401408 MYL3P08590 195 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 OSBPP22059 807 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 CASP2P42575 452 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 TOMM20Q15388 145 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 SLC4A8Q2Y0W8 1093 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 GRAMD1BQ3KR37 738 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 CCDC70Q6NSX1 233 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 CLP1Q92989 425 aaKnown RBP4.74□□□□□ -1.65
CLHC1-201ENST00000401408 C12orf49Q9H741 205 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 ENAMQ9NRM1 1142 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 RRP7BPQ9NSQ0 103 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 CLIC5Q9NZA1 410 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 PARP2Q9UGN5 583 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 EVLQ9UI08 416 aaPredicted RBP4.74□□□□□ -1.65
CLHC1-201ENST00000401408 MRVI1Q9Y6F6 885 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 DAPK1P53355 1430 aa4.74□□□□□ -1.65
CLHC1-201ENST00000401408 COL14A1Q05707 1796 aaKnown RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 CDC45O75419 566 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PTPN5P54829 565 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 ZKSCAN8Q15776 578 aaPredicted RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 UVSSAQ2YD98 709 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 TAS1R3Q7RTX0 852 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.73□□□□□ -1.652e-8■■□□□ 14.1
CLHC1-201ENST00000401408 LMNTD2Q8IXW0 634 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PGBD3Q8N328 593 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PTPRHQ9HD43 1115 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PEAK1Q9H792 1746 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 FMN2Q9NZ56 1722 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PABPN1LA6NDY0 278 aaKnown RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 GOLGA6L6A8MZA4 724 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 NR1I2O75469 434 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 CTHP32929 405 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 CLK1P49759 484 aaKnown RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 EXOSC10Q01780 885 aaKnown RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 MAP2K1Q02750 393 aaPredicted RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 WASHC5Q12768 1159 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 PTGDRQ13258 359 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 FAM182BQ5T319 152 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 RIC3Q7Z5B4 369 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 RELL1Q8IUW5 271 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 EFCAB3Q8N7B9 438 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 KIAA1958Q8N8K9 716 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 E2F7Q96AV8 911 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 FAM13BQ9NYF5 915 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 HFM1A2PYH4 1435 aa4.73□□□□□ -1.65
CLHC1-201ENST00000401408 RGPD8O14715 1765 aaPredicted RBP4.73□□□□□ -1.65
CLHC1-201ENST00000401408 FAM83GA6ND36 823 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 FGRP09769 529 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 HCLS1P14317 486 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 SEC13P55735 322 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 LRRC41Q15345 812 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ACBD5Q5T8D3 534 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ARMC3Q5W041 872 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 PDXDC1Q6P996 788 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 KSR2Q6VAB6 950 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 CKAP2LQ8IYA6 745 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 IFNL3Q8IZI9 196 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 GOLGA1Q92805 767 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 TTC14Q96N46 770 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 SRPK1Q96SB4 655 aaKnown RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ACAD8Q9UKU7 415 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ODF2LQ9ULJ1 636 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 PPP2R3BQ9Y5P8 575 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 SPATA31A5Q5VU36 1347 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 SPATA31A7Q8IWB4 1347 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ALS2Q96Q42 1657 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 TRPM3Q9HCF6 1732 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 TNRC18O15417 2968 aaPredicted RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 CCDC144AA2RUR9 1427 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 TNS3Q68CZ2 1445 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 RRBP1Q9P2E9 1410 aaKnown RBP4.72□□□□□ -1.65
CLHC1-201ENST00000401408 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 PRSS47A8MTI9 375 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 FOXO3O43524 673 aa4.72□□□□□ -1.65
CLHC1-201ENST00000401408 ICMTO60725 284 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms