RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 NAA16Q6N069 864 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-202ENST00000400353 LPIN2Q92539 896 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
LINC00649-202ENST00000400353 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
LINC00649-202ENST00000400353 AFF2P51816 1311 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
LINC00649-202ENST00000400353 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
LINC00649-202ENST00000400353 MYH7P12883 1935 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 EP400Q96L91 3159 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
LINC00649-202ENST00000400353 H3BQV1 296 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SLC5A1P13866 664 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SCRN1Q12765 414 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SECISBP2LQ93073 1101 aaKnown RBP12.66□□□□□ -0.38
LINC00649-202ENST00000400353 LAMB2P55268 1798 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 RGL2O15211 777 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 ADD2P35612 726 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 MCAMP43121 646 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SIK1P57059 783 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 EVCP57679 992 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 SCARF1Q14162 830 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 TCHHQ07283 1943 aa12.66□□□□□ -0.38
LINC00649-202ENST00000400353 FGFR2P21802 821 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 RESTQ13127 1097 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
LINC00649-202ENST00000400353 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 ZSCAN30Q86W11 494 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
LINC00649-202ENST00000400353 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
LINC00649-202ENST00000400353 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
LINC00649-202ENST00000400353 GPAA1O43292 621 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 JAK2O60674 1132 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 CAMTA2O94983 1202 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 MCM5P33992 734 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 APOBRQ0VD83 1088 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 SUSD4Q5VX71 490 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 TTC6Q86TZ1 520 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 RGS22Q8NE09 1264 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 NCOA7Q8NI08 942 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 SPATA32Q96LK8 384 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 CFAP45Q9UL16 551 aa12.65□□□□□ -0.39
LINC00649-202ENST00000400353 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 ZNF213O14771 459 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 DHX16O60231 1041 aaKnown RBP12.64□□□□□ -0.39
LINC00649-202ENST00000400353 VPS72Q15906 364 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 RALYLQ86SE5 291 aaKnown RBP12.64□□□□□ -0.39
LINC00649-202ENST00000400353 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
LINC00649-202ENST00000400353 A0A0G2JS52 829 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 FGAP02671 866 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
LINC00649-202ENST00000400353 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
LINC00649-202ENST00000400353 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 FOXP2O15409 715 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
LINC00649-202ENST00000400353 TRDNQ13061 729 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 ALX1Q15699 326 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 SLC9C2Q5TAH2 1124 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 TTLL5Q6EMB2 1281 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
LINC00649-202ENST00000400353 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
LINC00649-202ENST00000400353 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
LINC00649-202ENST00000400353 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
LINC00649-202ENST00000400353 PRC1O43663 620 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 CTDNEP1O95476 244 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 NTSR2O95665 410 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 PDE6AP16499 860 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 PHKA1P46020 1223 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 ITPK1Q13572 414 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
LINC00649-202ENST00000400353 FUCA2Q9BTY2 467 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 NUP62CLQ9H1M0 184 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
LINC00649-202ENST00000400353 DDX60Q8IY21 1712 aaKnown RBP12.61□□□□□ -0.39
LINC00649-202ENST00000400353 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 MAP3K12Q12852 859 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms