RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 NEDD4P46934 1319 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 E7EWF7 191 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 SEC31AO94979 1220 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 TPM4P67936 248 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 HAUS7Q99871 368 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 NFAT5O94916 1531 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 ABCC6O95255 1503 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 ETF1P62495 437 aaKnown RBP16.22■□□□□ 0.19
APOB-202ENST00000399256 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 NCAPHQ15003 741 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 MNS1Q8NEH6 495 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 BPIFA3Q9BQP9 254 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
APOB-202ENST00000399256 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
APOB-202ENST00000399256 FANCCQ00597 558 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 XAGE3Q8WTP9 111 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
APOB-202ENST00000399256 A0A1W2PQ27 194 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 A0A1W2PQ64 194 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 GOLIM4O00461 696 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 RFX5P48382 616 aaPredicted RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 NLRP12P59046 1061 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 EPC1Q9H2F5 836 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 FANCGO15287 622 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 PIP4K2AP48426 406 aaPredicted RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 HNRNPH2P55795 449 aaKnown RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 CARD6Q9BX69 1037 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
APOB-202ENST00000399256 ARGLU1Q9NWB6 273 aaPredicted RBP16.21■□□□□ 0.19
APOB-202ENST00000399256 ZNF202O95125 648 aa16.21■□□□□ 0.18
APOB-202ENST00000399256 ZRANB2O95218 330 aaKnown RBP eCLIP16.21■□□□□ 0.18
APOB-202ENST00000399256 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.18
APOB-202ENST00000399256 SLIT3O75094 1523 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 SPTLC2O15270 562 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 KCNJ6P48051 423 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 COPS6Q7L5N1 327 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 DPF2Q92785 391 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.2■□□□□ 0.18
APOB-202ENST00000399256 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 RFX7Q2KHR2 1363 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 PHLPP2Q6ZVD8 1323 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 SH3TC1Q8TE82 1336 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 FAM193AP78312 1265 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 AMOTQ4VCS5 1084 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 BRINP3Q76B58 766 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 UBE3BQ7Z3V4 1068 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
APOB-202ENST00000399256 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
APOB-202ENST00000399256 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 TRIM65Q6PJ69 517 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 NEK11Q8NG66 645 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
APOB-202ENST00000399256 KCNG4Q8TDN1 519 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
APOB-202ENST00000399256 C8orf76Q96K31 380 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 NEUROD6Q96NK8 337 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 TADA3O75528 432 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 PFKFB1P16118 471 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 CAPN2P17655 700 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
APOB-202ENST00000399256 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
APOB-202ENST00000399256 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
APOB-202ENST00000399256 SERPINC1P01008 464 aa16.18■□□□□ 0.18
APOB-202ENST00000399256 UBASH3AP57075 661 aa16.18■□□□□ 0.18
APOB-202ENST00000399256 DSCC1Q9BVC3 393 aa16.18■□□□□ 0.18
APOB-202ENST00000399256 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
APOB-202ENST00000399256 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
APOB-202ENST00000399256 TUBB4AP04350 444 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
APOB-202ENST00000399256 EVCP57679 992 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 MYSM1Q5VVJ2 828 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 MROH7-TTC4A0A0A0MT08 1334 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 CCP110O43303 1012 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
APOB-202ENST00000399256 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
APOB-202ENST00000399256 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms