RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
RPRD1A-202ENST00000399022 PPRC1Q5VV67 1664 aaKnown RBP16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 SLC5A1P13866 664 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 SYKP43405 635 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 EBAG9O00559 213 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 TMEM67Q5HYA8 995 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 DDX41Q9UJV9 622 aaKnown RBP16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 A0A1B0GVL5 298 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 KIF2CQ99661 725 aa16.71■□□□□ 0.27
RPRD1A-202ENST00000399022 IL2RBP14784 551 aa16.71■□□□□ 0.26
RPRD1A-202ENST00000399022 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.26
RPRD1A-202ENST00000399022 CLEC17AQ6ZS10 378 aa16.71■□□□□ 0.26
RPRD1A-202ENST00000399022 RASEFQ8IZ41 740 aa16.71■□□□□ 0.26
RPRD1A-202ENST00000399022 AOX1Q06278 1338 aa16.71■□□□□ 0.26
RPRD1A-202ENST00000399022 LAMC1P11047 1609 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 ACSBG1Q96GR2 724 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 CCDC102BQ68D86 513 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
RPRD1A-202ENST00000399022 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 HDXQ7Z353 690 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 ZDHHC9Q9Y397 364 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 ABCA9Q8IUA7 1624 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 RXRAP19793 462 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 FBXO38Q6PIJ6 1188 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 CCDC175P0C221 793 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 CEP112Q8N8E3 955 aa16.69■□□□□ 0.26
RPRD1A-202ENST00000399022 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 CUL4AQ13619 759 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 A0A0D9SFI3 127 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 NEURL1BA8MQ27 555 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 PRC1O43663 620 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 NR1I2O75469 434 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 TXLNAP40222 546 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 MICALCLQ6ZW33 695 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
RPRD1A-202ENST00000399022 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.265e-6■□□□□ 9.2
RPRD1A-202ENST00000399022 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 KCNG4Q8TDN1 519 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 WASF1Q92558 559 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 LRRC7Q96NW7 1537 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 CAVIN4Q5BKX8 364 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 ZNF569Q5MCW4 686 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 DNA2P51530 1060 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 ME3Q16798 604 aa16.67■□□□□ 0.26
RPRD1A-202ENST00000399022 JAK2O60674 1132 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 WDHD1O75717 1129 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 NLRP1Q9C000 1473 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 CTAGE9A4FU28 777 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 EYA2O00167 538 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 SPTLC2O15270 562 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 SYCP1Q15431 976 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 RABEP2Q9H5N1 569 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 SPTLC3Q9NUV7 552 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 TLR7Q9NYK1 1049 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 STAP2Q9UGK3 403 aa16.66■□□□□ 0.26
RPRD1A-202ENST00000399022 ETF1P62495 437 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 ALG1Q9BT22 464 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 XPO4Q9C0E2 1151 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 NF2P35240 595 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 IKQ13123 557 aaPredicted RBP16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 GOLGA6L7A0A1B0GV03 622 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 ATP2C2O75185 946 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms