RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 ZSCAN12O43309 604 aa5.65□□□□□ -1.5
TTC3-204ENST00000399017 NOL3O60936 208 aaKnown RBP5.65□□□□□ -1.5
TTC3-204ENST00000399017 TPD52P55327 224 aaPredicted RBP5.65□□□□□ -1.5
TTC3-204ENST00000399017 TRPC3Q13507 836 aa5.65□□□□□ -1.5
TTC3-204ENST00000399017 ZFP91Q96JP5 570 aaPredicted RBP5.65□□□□□ -1.5
TTC3-204ENST00000399017 AP5M1Q9H0R1 490 aa5.65□□□□□ -1.5
TTC3-204ENST00000399017 TNMDQ9H2S6 317 aa5.65□□□□□ -1.5
TTC3-204ENST00000399017 EXOC7Q9UPT5 735 aa5.65□□□□□ -1.5
TTC3-204ENST00000399017 ANKRD50Q9ULJ7 1429 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 PAXBP1Q9Y5B6 917 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 PPFIA2O75334 1257 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 PPP1R2P41236 205 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 UBXN4Q92575 508 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 ADPGKQ9BRR6 497 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 AGTPBP1Q9UPW5 1226 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 TACC3Q9Y6A5 838 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 KIF2AO00139 706 aaPredicted RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 ATF7P17544 494 aaPredicted RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 TMPOP42166 694 aaKnown RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 YWHAEP62258 255 aaKnown RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 SH2D4BQ5SQS7 431 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 LMBR1Q8WVP7 490 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 EHBP1L1Q8N3D4 1523 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 FAM13AO94988 1023 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 APBA3O96018 575 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 FBXW4P57775 412 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 HERC4Q5GLZ8 1057 aaPredicted RBP5.65□□□□□ -1.51
TTC3-204ENST00000399017 CNBD1Q8NA66 436 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 SLC12A6Q9UHW9 1150 aa5.65□□□□□ -1.51
TTC3-204ENST00000399017 ZBED4O75132 1171 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 SNRPA1P09661 255 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 OSBPP22059 807 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 SECISBP2LQ93073 1101 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 C8orf76Q96K31 380 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 TMCO5BA8MYB1 307 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 PPARGP37231 505 aaPredicted RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 SEPT6Q14141 434 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 TMEM57Q8N5G2 664 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 SMC6Q96SB8 1091 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 NSFL1CQ9UNZ2 370 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 PTPREP23469 700 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 MCMDC2Q4G0Z9 681 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 GSTA5Q7RTV2 222 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 CCDC63Q8NA47 563 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 RBM46Q8TBY0 533 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 PLB1Q6P1J6 1458 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 SFSWAPQ12872 951 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 INF2Q27J81 1249 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 N4BP2L2Q92802 583 aaPredicted RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 HAUS1Q96CS2 278 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 TTC14Q96N46 770 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 TRIM7Q9C029 511 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 FGD5Q6ZNL6 1462 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 LDHBP07195 334 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 VPS52Q8N1B4 723 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 TBC1D22AQ8WUA7 517 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 JPH2Q9BR39 696 aaPredicted RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 FAM107BQ9H098 131 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 WDR46O15213 610 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 YARSP54577 528 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 CCDC40Q4G0X9 1142 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 IWS1Q96ST2 819 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 EVA1BQ9NVM1 165 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 ZNF233A6NK53 670 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 GADD45BO75293 160 aaPredicted RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 ELF1P32519 619 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 DPH6Q7L8W6 267 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 PATL1Q86TB9 770 aaKnown RBP5.64□□□□□ -1.51
TTC3-204ENST00000399017 NIP7Q9Y221 180 aaKnown RBP eCLIP5.64□□□□□ -1.51
TTC3-204ENST00000399017 KIF21AQ7Z4S6 1674 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 CITO14578 2027 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 WDR17Q8IZU2 1322 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 CIITAP33076 1130 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 L3MBTL2Q969R5 705 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 CTAGE1Q96RT6 745 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 HAUS8Q9BT25 410 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 SERTAD1Q9UHV2 236 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 IQGAP2Q13576 1575 aa5.64□□□□□ -1.51
TTC3-204ENST00000399017 PRMT3O60678 531 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 PYGLP06737 847 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 TUBB4BP68371 445 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 C19orf44Q9H6X5 657 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 ZNF165P49910 485 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 SDCCAG8Q86SQ7 713 aaPredicted RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 C2orf69Q8N8R5 385 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 NUDT16Q96DE0 195 aaKnown RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 UPF3BQ9BZI7 483 aaKnown RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 FARP1Q9Y4F1 1045 aaPredicted RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 YEATS4O95619 227 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 NNMTP40261 264 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 RNASELQ05823 741 aaKnown RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 PPP2R5DQ14738 602 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 NAA16Q6N069 864 aaPredicted RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 PALM2Q8IXS6 379 aa5.63□□□□□ -1.51
TTC3-204ENST00000399017 ADD3Q9UEY8 706 aaKnown RBP5.63□□□□□ -1.51
TTC3-204ENST00000399017 USP21Q9UK80 565 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms