RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 MAST3O60307 1309 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 CWF19L2Q2TBE0 894 aaKnown RBP4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 TAF7LQ5H9L4 462 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 NOL9Q5SY16 702 aaKnown RBP4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 STRIP1Q5VSL9 837 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 RCSD1Q6JBY9 416 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 CNBD1Q8NA66 436 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 GREM2Q9H772 168 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 ITGA6P23229 1130 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 RFC4P35249 363 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 ZGPATQ8N5A5 531 aaKnown RBP4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 EVI5LQ96CN4 794 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 DBNLQ9UJU6 430 aaKnown RBP4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 GPR75-ASB3A0A0A6YYF3 556 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 RPS8P62241 208 aaKnown RBP4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
FNDC3A-202ENST00000398316 KIAA1217Q5T5P2 1943 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 APBB1O00213 710 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 NLRP3Q96P20 1036 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 ECHDC1Q9NTX5 307 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 NIP7Q9Y221 180 aaKnown RBP eCLIP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 CAPN2P17655 700 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 NOM1Q5C9Z4 860 aaKnown RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 KBTBD3Q8NAB2 608 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 TBC1D16Q8TBP0 767 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 EAF2Q96CJ1 260 aaPredicted RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 ZDHHC15Q96MV8 337 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 RIOK1Q9BRS2 568 aaKnown RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 ZCCHC17Q9NP64 241 aaKnown RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 DENND2AQ9ULE3 1009 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 GABPAQ06546 454 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 FAM43BQ6ZT52 329 aaPredicted RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 ACSBG1Q96GR2 724 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 FAM84BQ96KN1 310 aaPredicted RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 PPEF1O14829 653 aaPredicted RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 FAM83AQ86UY5 434 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 KCNN1Q92952 543 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 GNAT2P19087 354 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 DACT2Q5SW24 774 aa4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 ZC3H15Q8WU90 426 aaKnown RBP4.49□□□□□ -1.69
FNDC3A-202ENST00000398316 F6X3S4 739 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 EN1Q05925 392 aaPredicted RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 IFIT5Q13325 482 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 FTSJ3Q8IY81 847 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 MAP4K1Q92918 833 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 KIF2CQ99661 725 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 USP35Q9P2H5 1018 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 SRP68Q9UHB9 627 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 COG6Q9Y2V7 657 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 PARP3Q9Y6F1 533 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 ORC4O43929 436 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 MX1P20591 662 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 ADD2P35612 726 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 CHRNDQ07001 517 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 LMBR1LQ6UX01 489 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 SAMD3Q8N6K7 520 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 NFKBIEO00221 500 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 WDHD1O75717 1129 aaPredicted RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 MCCD1P59942 119 aaPredicted RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 EYA3Q99504 573 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 BACH2Q9BYV9 841 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 LSG1Q9H089 658 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 ERC2O15083 957 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 SGSM2O43147 1006 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 PRELPP51888 382 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 R3HDM1Q15032 1099 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 NECTIN1Q15223 517 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 GPR162Q16538 588 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 CCDC93Q567U6 631 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 FAM89AQ96GI7 184 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 NOL10Q9BSC4 688 aaKnown RBP4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 HMG20BQ9P0W2 317 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 SLC45A1Q9Y2W3 748 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 CNTNAP1P78357 1384 aa4.48□□□□□ -1.69
FNDC3A-202ENST00000398316 FRMPD4Q14CM0 1322 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 FAM161AQ3B820 660 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 UBE3BQ7Z3V4 1068 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 ANKRD18AQ8IVF6 992 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 ENTPD3O75355 529 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 TATDN1Q6P1N9 297 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 LBX2Q6XYB7 198 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 WDR66Q8TBY9 1149 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 HSPA4P34932 840 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 GPSM2P81274 684 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 DEFB132Q7Z7B7 95 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 TESPA1A2RU30 521 aaPredicted RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 MMP10P09238 476 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 LRRFIP1Q32MZ4 808 aaKnown RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 ZSCAN25Q6NSZ9 544 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 RBM42Q9BTD8 480 aaKnown RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 POLLQ9UGP5 575 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 TRMT112Q9UI30 125 aaKnown RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 COL4A4P53420 1690 aaPredicted RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 MROH7-TTC4A0A0A0MT08 1334 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 LOC102724159A0A0B4J2E5 919 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 PTCD1O75127 700 aaKnown RBP4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 CHMLP26374 656 aa4.47□□□□□ -1.69
FNDC3A-202ENST00000398316 RHBDL3P58872 404 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms