RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BCAMP50895 628 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 POLA2Q14181 598 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 DLK2Q6UY11 383 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 ITPRIPQ8IWB1 547 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 LPIN2Q92539 896 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 GGA3Q9NZ52 723 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 CNTNAP1P78357 1384 aa20.79■□□□□ 0.92
APTR-201ENST00000398043 PCNTO95613 3336 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 WNT10BO00744 389 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 IFIT1P09914 478 aaKnown RBP20.78■□□□□ 0.92
APTR-201ENST00000398043 NBPF9Q3BBW0 867 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 USP48Q86UV5 1035 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 OGFOD1Q8N543 542 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 CEP126Q9P2H0 1117 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 JAG2Q9Y219 1238 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
APTR-201ENST00000398043 PITPNM2Q9BZ72 1349 aa20.78■□□□□ 0.92
APTR-201ENST00000398043 ATP8B2P98198 1209 aa20.77■□□□□ 0.92
APTR-201ENST00000398043 CAVIN4Q5BKX8 364 aa20.77■□□□□ 0.92
APTR-201ENST00000398043 SSH3Q8TE77 659 aa20.77■□□□□ 0.92
APTR-201ENST00000398043 DCPSQ96C86 337 aaKnown RBP20.77■□□□□ 0.92
APTR-201ENST00000398043 RASSF10A6NK89 507 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 ADM5C9JUS6 153 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 SLC5A1P13866 664 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 ANGEL2Q5VTE6 544 aaKnown RBP20.76■□□□□ 0.91
APTR-201ENST00000398043 MTMR14Q8NCE2 650 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 C1orf115Q9H7X2 142 aa20.76■□□□□ 0.91
APTR-201ENST00000398043 IQSEC3Q9UPP2 1182 aaPredicted RBP20.76■□□□□ 0.91
APTR-201ENST00000398043 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
APTR-201ENST00000398043 ZBTB22O15209 634 aa20.75■□□□□ 0.91
APTR-201ENST00000398043 MFSD14BQ5SR56 506 aa20.75■□□□□ 0.91
APTR-201ENST00000398043 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
APTR-201ENST00000398043 HDAC9Q9UKV0 1011 aa20.75■□□□□ 0.91
APTR-201ENST00000398043 THSD7BQ9C0I4 1608 aa20.75■□□□□ 0.91
APTR-201ENST00000398043 CELF2O95319 508 aaKnown RBP20.74■□□□□ 0.91
APTR-201ENST00000398043 MS4A1P11836 297 aa20.74■□□□□ 0.91
APTR-201ENST00000398043 GRIK5Q16478 980 aa20.74■□□□□ 0.91
APTR-201ENST00000398043 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
APTR-201ENST00000398043 PCDHAC2Q9Y5I4 1007 aa20.74■□□□□ 0.91
APTR-201ENST00000398043 TLL2Q9Y6L7 1015 aa20.74■□□□□ 0.91
APTR-201ENST00000398043 AKAP11Q9UKA4 1901 aa20.73■□□□□ 0.91
APTR-201ENST00000398043 TFCP2Q12800 502 aa20.73■□□□□ 0.91
APTR-201ENST00000398043 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
APTR-201ENST00000398043 ADORA1P30542 326 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 CEP85Q6P2H3 762 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 SAPCD2Q86UD0 394 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 SULF1Q8IWU6 871 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 AOX1Q06278 1338 aa20.72■□□□□ 0.91
APTR-201ENST00000398043 F8W031 263 aaPredicted RBP20.71■□□□□ 0.91
APTR-201ENST00000398043 VEGFBP49765 207 aa20.71■□□□□ 0.91
APTR-201ENST00000398043 TIMM10P62072 90 aa20.71■□□□□ 0.91
APTR-201ENST00000398043 DEFB115Q30KQ5 88 aa20.71■□□□□ 0.91
APTR-201ENST00000398043 COG6Q9Y2V7 657 aa20.71■□□□□ 0.91
APTR-201ENST00000398043 NOP58Q9Y2X3 529 aaKnown RBP20.71■□□□□ 0.91
APTR-201ENST00000398043 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 SPDYE2BA6NHP3 402 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 SPDYE6P0CI01 402 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 PHKA1P46020 1223 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 PDE3AQ14432 1141 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 DLGAP5Q15398 846 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 CFAP100Q494V2 611 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 TBC1D22AQ8WUA7 517 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 CDCA5Q96FF9 252 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 PRMT6Q96LA8 375 aaPredicted RBP20.7■□□□□ 0.9
APTR-201ENST00000398043 ZBTB40Q9NUA8 1239 aa20.7■□□□□ 0.9
APTR-201ENST00000398043 ABT1Q9ULW3 272 aaKnown RBP20.7■□□□□ 0.9
APTR-201ENST00000398043 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
APTR-201ENST00000398043 PAPPA2Q9BXP8 1791 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 MYO5AQ9Y4I1 1855 aaKnown RBP20.69■□□□□ 0.9
APTR-201ENST00000398043 CHAF1AQ13111 956 aaPredicted RBP20.69■□□□□ 0.9
APTR-201ENST00000398043 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 ZNF408Q9H9D4 720 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 SERPINA10Q9UK55 444 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 DDX19BQ9UMR2 479 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 TTF2Q9UNY4 1162 aaKnown RBP20.69■□□□□ 0.9
APTR-201ENST00000398043 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
APTR-201ENST00000398043 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
APTR-201ENST00000398043 CCDC102BQ68D86 513 aa20.68■□□□□ 0.9
APTR-201ENST00000398043 SUGT1Q9Y2Z0 365 aa20.68■□□□□ 0.9
APTR-201ENST00000398043 SEMA3EO15041 775 aa20.67■□□□□ 0.9
APTR-201ENST00000398043 FRAT2O75474 233 aaPredicted RBP20.67■□□□□ 0.9
APTR-201ENST00000398043 HDLBPQ00341 1268 aaKnown RBP20.67■□□□□ 0.9
APTR-201ENST00000398043 XAGE2Q96GT9 111 aa20.67■□□□□ 0.9
APTR-201ENST00000398043 MRIQ9BWK5 157 aa20.67■□□□□ 0.9
APTR-201ENST00000398043 CRKP46108 304 aa20.66■□□□□ 0.9
APTR-201ENST00000398043 APOBEC3FQ8IUX4 373 aaKnown RBP20.66■□□□□ 0.9
APTR-201ENST00000398043 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
APTR-201ENST00000398043 GBA2Q9HCG7 927 aaPredicted RBP20.66■□□□□ 0.9
APTR-201ENST00000398043 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
APTR-201ENST00000398043 WDR33Q9C0J8 1336 aaKnown RBP20.66■□□□□ 0.9
APTR-201ENST00000398043 SALL1Q9NSC2 1324 aa20.66■□□□□ 0.9
APTR-201ENST00000398043 PDS5AQ29RF7 1337 aaKnown RBP20.65■□□□□ 0.9
APTR-201ENST00000398043 SURF6O75683 361 aaKnown RBP20.65■□□□□ 0.9
APTR-201ENST00000398043 RASGRF1Q13972 1273 aa20.65■□□□□ 0.9
APTR-201ENST00000398043 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
APTR-201ENST00000398043 SIRT2Q8IXJ6 389 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms