RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MPNDQ8N594 471 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 ANO2Q9NQ90 1003 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 CHGBP05060 677 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 ANP32AP39687 249 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 TGFB2P61812 414 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 MCMDC2Q4G0Z9 681 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 CC2D2BQ6DHV5 1058 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 ZSCAN25Q6NSZ9 544 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 ZNF804AQ7Z570 1209 aa23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 TDRD7Q8NHU6 1098 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-205ENST00000397761 PTGER2P43116 358 aa23.48■■□□□ 1.35
PDLIM2-205ENST00000397761 IL17RAQ96F46 866 aa23.48■■□□□ 1.35
PDLIM2-205ENST00000397761 KIF2CQ99661 725 aa23.48■■□□□ 1.35
PDLIM2-205ENST00000397761 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 IL1R1P14778 569 aa23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 DPEP1P16444 411 aa23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 ADD2P35612 726 aa23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 UBE3CQ15386 1083 aa23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 OLFM4Q6UX06 510 aa23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 TMX4Q9H1E5 349 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 IQSEC3Q9UPP2 1182 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-205ENST00000397761 CCDC171Q6TFL3 1326 aa23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 DPP8Q6V1X1 898 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 KIAA1211Q6ZU35 1233 aa23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 ZNF589Q86UQ0 364 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 TTLL6Q8N841 843 aa23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 APPBP2Q92624 585 aa23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 RTFDC1Q9BY42 306 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-205ENST00000397761 TCRBV5S4A2TA0A5A2 114 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 C6orf229H3BNL8 230 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 IGSF3O75054 1194 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 MAP3K12Q12852 859 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 SEC62Q99442 399 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 PPP1R1BQ9UD71 204 aaPredicted RBP23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 PSME4Q14997 1843 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 MAST3O60307 1309 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 SALL1Q9NSC2 1324 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 FER1L6Q2WGJ9 1857 aa23.45■■□□□ 1.34
PDLIM2-205ENST00000397761 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 IDH1O75874 414 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 PDE6AP16499 860 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 HSPA4P34932 840 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 PTH1RQ03431 593 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 WASHC4Q2M389 1173 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 SLFNL1Q499Z3 407 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 GRIPAP1Q4V328 841 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 SLC9C2Q5TAH2 1124 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 MAP4K1Q92918 833 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 CD209Q9NNX6 404 aa23.44■■□□□ 1.34
PDLIM2-205ENST00000397761 A0A0G2JLW4 131 aa23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 OSBP2Q969R2 916 aa23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 WWC3Q9ULE0 1092 aa23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 CD2APQ9Y5K6 639 aa23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 ANAPC15P60006 121 aa23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 TMED8Q6PL24 325 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-205ENST00000397761 KCNB2Q92953 911 aa23.42■■□□□ 1.34
PDLIM2-205ENST00000397761 EYA3Q99504 573 aa23.42■■□□□ 1.34
PDLIM2-205ENST00000397761 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
PDLIM2-205ENST00000397761 SCN9AQ15858 1988 aa23.42■■□□□ 1.34
PDLIM2-205ENST00000397761 M0R2C6 588 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 FRAT2O75474 233 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 MCCP23508 829 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 WDR66Q8TBY9 1149 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 COA1Q9GZY4 146 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 LAMA4Q16363 1823 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 ZNF532Q9HCE3 1301 aa23.41■■□□□ 1.34
PDLIM2-205ENST00000397761 CCDC129Q6ZRS4 1044 aa23.4■■□□□ 1.34
PDLIM2-205ENST00000397761 ZC3H12CQ9C0D7 883 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-205ENST00000397761 PUS7LQ9H0K6 701 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-205ENST00000397761 LRP2BPQ9P2M1 347 aa23.4■■□□□ 1.34
PDLIM2-205ENST00000397761 FAM205AQ6ZU69 1335 aa23.4■■□□□ 1.34
PDLIM2-205ENST00000397761 NECTIN1Q15223 517 aa23.39■■□□□ 1.34
PDLIM2-205ENST00000397761 ZGPATQ8N5A5 531 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-205ENST00000397761 MAGEB6Q8N7X4 407 aa23.39■■□□□ 1.34
PDLIM2-205ENST00000397761 DSCC1Q9BVC3 393 aa23.39■■□□□ 1.34
PDLIM2-205ENST00000397761 DDRGK1Q96HY6 314 aa23.38■■□□□ 1.33
PDLIM2-205ENST00000397761 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
PDLIM2-205ENST00000397761 ABCF2Q9UG63 623 aa23.38■■□□□ 1.33
PDLIM2-205ENST00000397761 PALD1Q9ULE6 856 aa23.38■■□□□ 1.33
PDLIM2-205ENST00000397761 ZNF384Q8TF68 577 aa23.37■■□□□ 1.33
PDLIM2-205ENST00000397761 RBM8AQ9Y5S9 174 aaKnown RBP23.37■■□□□ 1.33
PDLIM2-205ENST00000397761 C21orf2O43822 256 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 CHAF1AQ13111 956 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 CCDC93Q567U6 631 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 SPTY2D1Q68D10 685 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 RTKN2Q8IZC4 609 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 PSMD1Q99460 953 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 CDK5RAP2Q96SN8 1893 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 FOXP2O15409 715 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 GPAA1O43292 621 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 HSPD1P10809 573 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 RABEP1Q15276 862 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 NSUN4Q96CB9 384 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-205ENST00000397761 RAI14Q9P0K7 980 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms