RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MCM4P33991 863 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 DDIT3P35638 169 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 TGFB2P61812 414 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 ZNF804AQ7Z570 1209 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 AKAP11Q9UKA4 1901 aa23.22■■□□□ 1.31
PDLIM2-204ENST00000397760 RAD50Q92878 1312 aa23.21■■□□□ 1.31
PDLIM2-204ENST00000397760 ZFYP08048 801 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-204ENST00000397760 KIAA1211Q6ZU35 1233 aa23.21■■□□□ 1.31
PDLIM2-204ENST00000397760 TTLL6Q8N841 843 aa23.21■■□□□ 1.31
PDLIM2-204ENST00000397760 C7orf43Q8WVR3 580 aa23.21■■□□□ 1.31
PDLIM2-204ENST00000397760 IDH1O75874 414 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-204ENST00000397760 PTGER2P43116 358 aa23.2■■□□□ 1.3
PDLIM2-204ENST00000397760 SLFNL1Q499Z3 407 aa23.2■■□□□ 1.3
PDLIM2-204ENST00000397760 L1TD1Q5T7N2 865 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-204ENST00000397760 ZSCAN25Q6NSZ9 544 aa23.2■■□□□ 1.3
PDLIM2-204ENST00000397760 WASHC4Q2M389 1173 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 ZMYM1Q5SVZ6 1142 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 MED23Q9ULK4 1368 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 ZBTB22O15209 634 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 HELLSQ9NRZ9 838 aa23.19■■□□□ 1.3
PDLIM2-204ENST00000397760 SLC9C2Q5TAH2 1124 aa23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 CC2D2BQ6DHV5 1058 aa23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 TDRD7Q8NHU6 1098 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 SEC62Q99442 399 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 LSG1Q9H089 658 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 PDS5AQ29RF7 1337 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 COL1A1P02452 1464 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-204ENST00000397760 SLX4Q8IY92 1834 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 MAP3K12Q12852 859 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 C21orf2O43822 256 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 ADD2P35612 726 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 CHAF1AQ13111 956 aaPredicted RBP23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 ZNF589Q86UQ0 364 aaPredicted RBP23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 ZC3H12CQ9C0D7 883 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 LRP2BPQ9P2M1 347 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 ABCF2Q9UG63 623 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
PDLIM2-204ENST00000397760 LTBP1Q14766 1721 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 DDX11L8A8MPP1 907 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 KLHL34Q8N239 644 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 EYA3Q99504 573 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 KIF2CQ99661 725 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 WWC3Q9ULE0 1092 aa23.16■■□□□ 1.3
PDLIM2-204ENST00000397760 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 CCDC129Q6ZRS4 1044 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 APPBP2Q92624 585 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 OSBP2Q969R2 916 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 PIM2Q9P1W9 311 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 IL1R1P14778 569 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 PDE6AP16499 860 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 PTH1RQ03431 593 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 UBE3CQ15386 1083 aa23.15■■□□□ 1.3
PDLIM2-204ENST00000397760 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.29
PDLIM2-204ENST00000397760 PTMSP20962 102 aa23.14■■□□□ 1.29
PDLIM2-204ENST00000397760 RTFDC1Q9BY42 306 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-204ENST00000397760 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
PDLIM2-204ENST00000397760 DUOX1Q9NRD9 1551 aa23.14■■□□□ 1.29
PDLIM2-204ENST00000397760 MAST3O60307 1309 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 ZNF532Q9HCE3 1301 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 MCCP23508 829 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 COA1Q9GZY4 146 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 BRPF3Q9ULD4 1205 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 JAG2Q9Y219 1238 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
PDLIM2-204ENST00000397760 TCRBV5S4A2TA0A5A2 114 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 M0R2C6 588 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 GRIPAP1Q4V328 841 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 WDR66Q8TBY9 1149 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 DLEC1Q9Y238 1755 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 PUS7LQ9H0K6 701 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-204ENST00000397760 MAP4K1Q92918 833 aa23.11■■□□□ 1.29
PDLIM2-204ENST00000397760 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 SUPT20HQ8NEM7 779 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 G3V3G9 751 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 K7ELQ4 463 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 HSPA4P34932 840 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 DOK7Q18PE1 504 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 DALRD3Q5D0E6 543 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 DCAF8Q5TAQ9 597 aa23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 ISY1Q9ULR0 285 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-204ENST00000397760 SALL1Q9NSC2 1324 aa23.09■■□□□ 1.29
PDLIM2-204ENST00000397760 SPTY2D1Q68D10 685 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-204ENST00000397760 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
PDLIM2-204ENST00000397760 PRDX5P30044 214 aa23.08■■□□□ 1.28
PDLIM2-204ENST00000397760 RABEP1Q15276 862 aa23.08■■□□□ 1.28
PDLIM2-204ENST00000397760 SOGA3Q5TF21 947 aa23.08■■□□□ 1.28
PDLIM2-204ENST00000397760 RBM8AQ9Y5S9 174 aaKnown RBP23.08■■□□□ 1.28
PDLIM2-204ENST00000397760 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms