RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 MNAT1P51948 309 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 TTC5Q8N0Z6 440 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 DNAJC5Q9H3Z4 198 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 DLG5Q8TDM6 1919 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 NKX1-1Q15270 411 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 MSL3Q8N5Y2 521 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 PTGS1P23219 599 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 AKAP17AQ02040 695 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 LRP10Q7Z4F1 713 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 RIC3Q7Z5B4 369 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 CEP126Q9P2H0 1117 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 PIK3C2AO00443 1686 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 TOB2Q14106 344 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 TSHZ3Q63HK5 1081 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 NYAP1Q6ZVC0 841 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 NSUN7Q8NE18 718 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 A0A0D9SFI3 127 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 SMARCE1Q969G3 411 aa6.29□□□□□ -1.4
PTPRD-205ENST00000397611 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
PTPRD-205ENST00000397611 CASP7P55210 303 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 RGL2O15211 777 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 BMP15O95972 392 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 NFXL1Q6ZNB6 911 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 CMA1P23946 247 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TUBB2AQ13885 445 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ALX1Q15699 326 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TUBB2BQ9BVA1 445 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 KRBA2Q6ZNG9 492 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 CADPS2Q86UW7 1296 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 STK11IPQ8N1F8 1099 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TRIML1Q8N9V2 468 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 CBX8Q9HC52 389 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TUBE1Q9UJT0 475 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 LIG1P18858 919 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TTC31Q49AM3 519 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TMC6Q7Z403 805 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ZSCAN12O43309 604 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 PHKG2P15735 406 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 CFAP100Q494V2 611 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 BCL2L12Q9HB09 334 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 TBC1D2BQ9UPU7 963 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 LARGE1O95461 756 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 LIFRP42702 1097 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 ETF1P62495 437 aaKnown RBP6.28□□□□□ -1.4
PTPRD-205ENST00000397611 JAKMIP3Q5VZ66 844 aa6.28□□□□□ -1.4
PTPRD-205ENST00000397611 MYSM1Q5VVJ2 828 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 XAGE3Q8WTP9 111 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 FMN2Q9NZ56 1722 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 SKILP12757 684 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 ATP2B1P20020 1258 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 UBE3CQ15386 1083 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 CDC37L1Q7L3B6 337 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 COPS6Q7L5N1 327 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 SGMS1Q86VZ5 419 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 SLU7O95391 586 aaKnown RBP6.27□□□□□ -1.41
PTPRD-205ENST00000397611 MICALL1Q8N3F8 863 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 APPBP2Q92624 585 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 TMEM87BQ96K49 555 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 MPHOSPH8Q99549 860 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 DDX41Q9UJV9 622 aaKnown RBP6.27□□□□□ -1.41
PTPRD-205ENST00000397611 RNF113AO15541 343 aaKnown RBP6.27□□□□□ -1.41
PTPRD-205ENST00000397611 LINC00301Q8NCQ3 95 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-205ENST00000397611 CRACR2AQ9BSW2 395 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
PTPRD-205ENST00000397611 CDHR2Q9BYE9 1310 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 C1orf167Q5SNV9 1468 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 SLC39A14Q15043 492 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 FILIP1LQ4L180 1135 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 WASF1Q92558 559 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 FAM227BQ96M60 508 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 CEP89Q96ST8 783 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 GBP3Q9H0R5 595 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 A0A087WZG4 1122 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 PTPDC1A2A3K4 754 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 ZSCAN20P17040 1043 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 MPRIPQ6WCQ1 1025 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 CWF19L2Q2TBE0 894 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 ANO6Q4KMQ2 910 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 BOLA2Q9H3K6 86 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 STK36Q9NRP7 1315 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 GOLGA6L10A6NI86 522 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 BICC1Q9H694 974 aaKnown RBP6.26□□□□□ -1.41
PTPRD-205ENST00000397611 NF2P35240 595 aa6.26□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC181Q5TID7 509 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms