RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TTF1Q15361 905 aaPredicted RBP25.62■■□□□ 1.69
CPNE1-204ENST00000397443 DOK7Q18PE1 504 aa25.62■■□□□ 1.69
CPNE1-204ENST00000397443 CCDC93Q567U6 631 aa25.62■■□□□ 1.69
CPNE1-204ENST00000397443 CC2D2BQ6DHV5 1058 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 FHDC1Q9C0D6 1143 aaPredicted RBP25.61■■□□□ 1.69
CPNE1-204ENST00000397443 CD209Q9NNX6 404 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 A0A0D9SFI3 127 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 G3V3G9 751 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 DCAF8Q5TAQ9 597 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 EYA3Q99504 573 aa25.61■■□□□ 1.69
CPNE1-204ENST00000397443 HIP1O00291 1037 aa25.6■■□□□ 1.69
CPNE1-204ENST00000397443 SEMA3EO15041 775 aa25.59■■□□□ 1.69
CPNE1-204ENST00000397443 TDRD7Q8NHU6 1098 aaKnown RBP25.59■■□□□ 1.69
CPNE1-204ENST00000397443 UPF2Q9HAU5 1272 aaKnown RBP25.59■■□□□ 1.69
CPNE1-204ENST00000397443 LRP2BPQ9P2M1 347 aa25.59■■□□□ 1.69
CPNE1-204ENST00000397443 BRCA1P38398 1863 aaKnown RBP25.59■■□□□ 1.69
CPNE1-204ENST00000397443 RNF113AO15541 343 aaKnown RBP25.58■■□□□ 1.69
CPNE1-204ENST00000397443 AOC3Q16853 763 aa25.58■■□□□ 1.69
CPNE1-204ENST00000397443 RUFY2Q8WXA3 655 aa25.58■■□□□ 1.69
CPNE1-204ENST00000397443 SEC62Q99442 399 aaKnown RBP25.58■■□□□ 1.69
CPNE1-204ENST00000397443 DBNDD1Q9H9R9 158 aa25.58■■□□□ 1.69
CPNE1-204ENST00000397443 SLC9C2Q5TAH2 1124 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 RTKN2Q8IZC4 609 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 FBXW7Q969H0 707 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 RTFDC1Q9BY42 306 aaPredicted RBP25.57■■□□□ 1.68
CPNE1-204ENST00000397443 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.57■■□□□ 1.683e-7■■■■■ 27.1
CPNE1-204ENST00000397443 SNED1Q8TER0 1413 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 UTRNP46939 3433 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 SGSM2O43147 1006 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 ANO2Q9NQ90 1003 aa25.57■■□□□ 1.68
CPNE1-204ENST00000397443 IL1R1P14778 569 aa25.56■■□□□ 1.68
CPNE1-204ENST00000397443 COA1Q9GZY4 146 aa25.56■■□□□ 1.68
CPNE1-204ENST00000397443 RAI14Q9P0K7 980 aa25.56■■□□□ 1.68
CPNE1-204ENST00000397443 RFX7Q2KHR2 1363 aa25.56■■□□□ 1.68
CPNE1-204ENST00000397443 MAP3K12Q12852 859 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 CCDC129Q6ZRS4 1044 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 ZNF277Q9NRM2 450 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-204ENST00000397443 MYH7P12883 1935 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 PPIP5K2O43314 1243 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 REC8O95072 547 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 LRRFIP1Q32MZ4 808 aaKnown RBP25.55■■□□□ 1.68
CPNE1-204ENST00000397443 MAGEB6Q8N7X4 407 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 SUPT20HQ8NEM7 779 aa25.55■■□□□ 1.68
CPNE1-204ENST00000397443 CHD4Q14839 1912 aa25.54■■□□□ 1.68
CPNE1-204ENST00000397443 SOGA3Q5TF21 947 aa25.54■■□□□ 1.68
CPNE1-204ENST00000397443 ZNF589Q86UQ0 364 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-204ENST00000397443 RBM19Q9Y4C8 960 aaKnown RBP25.54■■□□□ 1.68
CPNE1-204ENST00000397443 PDE6AP16499 860 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 PRDX5P30044 214 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 ADD2P35612 726 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 GTF2IP78347 998 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 ZMYM1Q5SVZ6 1142 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 ZSCAN25Q6NSZ9 544 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 ZNF532Q9HCE3 1301 aa25.53■■□□□ 1.68
CPNE1-204ENST00000397443 SOCS7O14512 581 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 ZFYP08048 801 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-204ENST00000397443 GRIPAP1Q4V328 841 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 OSBP2Q969R2 916 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 PSMD1Q99460 953 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 KCNQ5Q9NR82 932 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 DOCK2Q92608 1830 aa25.52■■□□□ 1.68
CPNE1-204ENST00000397443 ECE2O60344 883 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 KIAA2012Q0VF49 1180 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 MCMDC2Q4G0Z9 681 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 KIAA1211Q6ZU35 1233 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 WDR66Q8TBY9 1149 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 SYT17Q9BSW7 474 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 C22orf23Q9BZE7 217 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 PDS5AQ29RF7 1337 aaKnown RBP25.51■■□□□ 1.67
CPNE1-204ENST00000397443 M0R2C6 588 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 ERICH6Q7L0X2 663 aa25.51■■□□□ 1.67
CPNE1-204ENST00000397443 PUS7LQ9H0K6 701 aaKnown RBP25.51■■□□□ 1.67
CPNE1-204ENST00000397443 MAST3O60307 1309 aa25.5■■□□□ 1.67
CPNE1-204ENST00000397443 GRIK5Q16478 980 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 MFSD14BQ5SR56 506 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 LARGE2Q8N3Y3 721 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 APPBP2Q92624 585 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 USP26Q9BXU7 913 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 HELLSQ9NRZ9 838 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 RAD50Q92878 1312 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 TAOK3Q9H2K8 898 aa25.49■■□□□ 1.67
CPNE1-204ENST00000397443 TCRBV5S4A2TA0A5A2 114 aa25.48■■□□□ 1.67
CPNE1-204ENST00000397443 EIF5BO60841 1220 aaKnown RBP25.48■■□□□ 1.67
CPNE1-204ENST00000397443 PTH1RQ03431 593 aa25.48■■□□□ 1.67
CPNE1-204ENST00000397443 TTLL5Q6EMB2 1281 aa25.48■■□□□ 1.67
CPNE1-204ENST00000397443 MXD3Q9BW11 206 aa25.48■■□□□ 1.67
CPNE1-204ENST00000397443 LDHBP07195 334 aaKnown RBP25.47■■□□□ 1.67
CPNE1-204ENST00000397443 CYP7A1P22680 504 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 MECOMQ03112 1051 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 UBE3CQ15386 1083 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 PODNQ7Z5L7 613 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 ZGPATQ8N5A5 531 aaKnown RBP25.47■■□□□ 1.67
CPNE1-204ENST00000397443 TBC1D32Q96NH3 1257 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 LSG1Q9H089 658 aaKnown RBP25.47■■□□□ 1.67
CPNE1-204ENST00000397443 CCDC171Q6TFL3 1326 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 NFKBIEO00221 500 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 DZIP1Q86YF9 867 aaKnown RBP25.47■■□□□ 1.67
CPNE1-204ENST00000397443 MIGA1Q8NAN2 632 aa25.47■■□□□ 1.67
CPNE1-204ENST00000397443 RASSF7Q02833 373 aa25.46■■□□□ 1.67
CPNE1-204ENST00000397443 SPTY2D1Q68D10 685 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms