RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 OTOFQ9HC10 1997 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 KCNJ4P48050 445 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 SUPT20HL1Q3ZLR7 823 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 PLA2G12BQ9BX93 195 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
SEC13-206ENST00000397102 APAF1O14727 1248 aa19.2■□□□□ 0.66
SEC13-206ENST00000397102 MYO1BO43795 1136 aa19.2■□□□□ 0.66
SEC13-206ENST00000397102 EN2P19622 333 aaPredicted RBP19.2■□□□□ 0.66
SEC13-206ENST00000397102 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
SEC13-206ENST00000397102 TESPA1A2RU30 521 aaPredicted RBP19.19■□□□□ 0.66
SEC13-206ENST00000397102 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 GJA5P36382 358 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
SEC13-206ENST00000397102 SP3Q02447 781 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 CHRNDQ07001 517 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 PCDHAC2Q9Y5I4 1007 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
SEC13-206ENST00000397102 MKI67P46013 3256 aaKnown RBP19.18■□□□□ 0.66
SEC13-206ENST00000397102 CLRN2A0PK11 232 aa19.18■□□□□ 0.66
SEC13-206ENST00000397102 CSF1RP07333 972 aa19.18■□□□□ 0.66
SEC13-206ENST00000397102 FKBP1AP62942 108 aaKnown RBP19.18■□□□□ 0.66
SEC13-206ENST00000397102 CFAP100Q494V2 611 aa19.18■□□□□ 0.66
SEC13-206ENST00000397102 NBPF12Q5TAG4 269 aaPredicted RBP19.18■□□□□ 0.66
SEC13-206ENST00000397102 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
SEC13-206ENST00000397102 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
SEC13-206ENST00000397102 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
SEC13-206ENST00000397102 USP2O75604 605 aaPredicted RBP19.17■□□□□ 0.66
SEC13-206ENST00000397102 PTPN18Q99952 460 aa19.17■□□□□ 0.66
SEC13-206ENST00000397102 TMEM106CQ9BVX2 250 aa19.17■□□□□ 0.66
SEC13-206ENST00000397102 VEZTQ9HBM0 779 aa19.17■□□□□ 0.66
SEC13-206ENST00000397102 F8W031 263 aaPredicted RBP19.16■□□□□ 0.66
SEC13-206ENST00000397102 IL1R1P14778 569 aa19.16■□□□□ 0.66
SEC13-206ENST00000397102 CASP7P55210 303 aa19.16■□□□□ 0.66
SEC13-206ENST00000397102 CAP1Q01518 475 aa19.16■□□□□ 0.66
SEC13-206ENST00000397102 GCKRQ14397 625 aa19.16■□□□□ 0.66
SEC13-206ENST00000397102 ZNF333Q96JL9 665 aa19.16■□□□□ 0.66
SEC13-206ENST00000397102 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
SEC13-206ENST00000397102 RASA3Q14644 834 aa19.15■□□□□ 0.66
SEC13-206ENST00000397102 ZNF804AQ7Z570 1209 aa19.15■□□□□ 0.66
SEC13-206ENST00000397102 ANKRD18BA2A2Z9 1011 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 SNAP23O00161 211 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 ARHGEF6Q15052 776 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 G2E3Q7L622 706 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 OPTNQ96CV9 577 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 AOX1Q06278 1338 aa19.14■□□□□ 0.65
SEC13-206ENST00000397102 CENPFP49454 3210 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 TAF5LO75529 589 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
SEC13-206ENST00000397102 TNFAIP1Q13829 316 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 MS4A4AQ96JQ5 239 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 ELP3Q9H9T3 547 aa19.13■□□□□ 0.65
SEC13-206ENST00000397102 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
SEC13-206ENST00000397102 RBM5P52756 815 aaKnown RBP eCLIP19.12■□□□□ 0.65
SEC13-206ENST00000397102 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
SEC13-206ENST00000397102 HELBQ8NG08 1087 aaPredicted RBP19.12■□□□□ 0.65
SEC13-206ENST00000397102 COLQQ9Y215 455 aaPredicted RBP19.12■□□□□ 0.65
SEC13-206ENST00000397102 BRCA2P51587 3418 aa19.12■□□□□ 0.65
SEC13-206ENST00000397102 CACNA1FO60840 1977 aa19.12■□□□□ 0.65
SEC13-206ENST00000397102 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
SEC13-206ENST00000397102 TAF1CQ15572 869 aaPredicted RBP19.11■□□□□ 0.65
SEC13-206ENST00000397102 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
SEC13-206ENST00000397102 ZFYVE28Q9HCC9 887 aa19.11■□□□□ 0.65
SEC13-206ENST00000397102 PTCH2Q9Y6C5 1203 aa19.11■□□□□ 0.65
SEC13-206ENST00000397102 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
SEC13-206ENST00000397102 SPDYE2Q495Y8 402 aa19.1■□□□□ 0.65
SEC13-206ENST00000397102 LINS1Q8NG48 757 aa19.1■□□□□ 0.65
SEC13-206ENST00000397102 BRI3BPQ8WY22 251 aa19.1■□□□□ 0.65
SEC13-206ENST00000397102 JAG2Q9Y219 1238 aa19.1■□□□□ 0.65
SEC13-206ENST00000397102 CCL15-CCL14A0A0B4J2E2 113 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 GTF2A2P52657 109 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 FLIIQ13045 1269 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
SEC13-206ENST00000397102 CCL15Q16663 113 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 SLC4A8Q2Y0W8 1093 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.09■□□□□ 0.65
SEC13-206ENST00000397102 DNAAF4Q8WXU2 420 aa19.09■□□□□ 0.65
SEC13-206ENST00000397102 ZNF70Q9UC06 446 aaPredicted RBP19.09■□□□□ 0.65
SEC13-206ENST00000397102 FAM205AQ6ZU69 1335 aa19.08■□□□□ 0.65
SEC13-206ENST00000397102 TEPSINQ96N21 525 aa19.08■□□□□ 0.64
SEC13-206ENST00000397102 ZSWIM8A7E2V4 1837 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 FOXO4P98177 505 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
SEC13-206ENST00000397102 VGLL4Q14135 290 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 FAM43AQ8N2R8 423 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 TDRD3Q9H7E2 651 aaKnown RBP19.07■□□□□ 0.64
SEC13-206ENST00000397102 SERPINA10Q9UK55 444 aa19.07■□□□□ 0.64
SEC13-206ENST00000397102 MAP3K9P80192 1104 aa19.06■□□□□ 0.64
SEC13-206ENST00000397102 MFSD14BQ5SR56 506 aa19.06■□□□□ 0.64
SEC13-206ENST00000397102 CDAN1Q8IWY9 1227 aa19.06■□□□□ 0.64
SEC13-206ENST00000397102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.06■□□□□ 0.64
SEC13-206ENST00000397102 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
SEC13-206ENST00000397102 TTF2Q9UNY4 1162 aaKnown RBP19.06■□□□□ 0.64
SEC13-206ENST00000397102 CHMP3Q9Y3E7 222 aa19.06■□□□□ 0.64
SEC13-206ENST00000397102 CSADQ9Y600 493 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms