RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 ADD2P35612 726 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
MCF2L-209ENST00000397036 PTGER2P43116 358 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 APPBP2Q92624 585 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 EYA3Q99504 573 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 ANO2Q9NQ90 1003 aa16.39■□□□□ 0.21
MCF2L-209ENST00000397036 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 DPEP1P16444 411 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 ANAPC15P60006 121 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 COA1Q9GZY4 146 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 CD209Q9NNX6 404 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
MCF2L-209ENST00000397036 MCCP23508 829 aa16.37■□□□□ 0.21
MCF2L-209ENST00000397036 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
MCF2L-209ENST00000397036 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
MCF2L-209ENST00000397036 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
MCF2L-209ENST00000397036 ZC3H12CQ9C0D7 883 aaKnown RBP16.37■□□□□ 0.21
MCF2L-209ENST00000397036 SNED1Q8TER0 1413 aa16.37■□□□□ 0.21
MCF2L-209ENST00000397036 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-209ENST00000397036 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 KCNB2Q92953 911 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
MCF2L-209ENST00000397036 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
MCF2L-209ENST00000397036 PDE6AP16499 860 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 HSPA4P34932 840 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 SPTY2D1Q68D10 685 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-209ENST00000397036 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 PSDA5PKW4 1024 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-209ENST00000397036 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-209ENST00000397036 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 KIF2CQ99661 725 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
MCF2L-209ENST00000397036 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-209ENST00000397036 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 PSMD1Q99460 953 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-209ENST00000397036 SUGT1Q9Y2Z0 365 aa16.34■□□□□ 0.21
MCF2L-209ENST00000397036 MAST3O60307 1309 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 PTH1RQ03431 593 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 ERICH6Q7L0X2 663 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
MCF2L-209ENST00000397036 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
MCF2L-209ENST00000397036 DUOX1Q9NRD9 1551 aa16.32■□□□□ 0.2
MCF2L-209ENST00000397036 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
MCF2L-209ENST00000397036 DLEC1Q9Y238 1755 aa16.32■□□□□ 0.2
MCF2L-209ENST00000397036 CHGBP05060 677 aa16.32■□□□□ 0.2
MCF2L-209ENST00000397036 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-209ENST00000397036 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
MCF2L-209ENST00000397036 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-209ENST00000397036 KIAA2012Q0VF49 1180 aa16.31■□□□□ 0.2
MCF2L-209ENST00000397036 RABEP1Q15276 862 aa16.31■□□□□ 0.2
MCF2L-209ENST00000397036 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
MCF2L-209ENST00000397036 ABCF2Q9UG63 623 aa16.31■□□□□ 0.2
MCF2L-209ENST00000397036 RPAP1Q9BWH6 1393 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 M0R2C6 588 aa16.3■□□□□ 0.2
MCF2L-209ENST00000397036 C21orf2O43822 256 aa16.3■□□□□ 0.2
MCF2L-209ENST00000397036 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 RNF20Q5VTR2 975 aa16.3■□□□□ 0.2
MCF2L-209ENST00000397036 NSUN4Q96CB9 384 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
MCF2L-209ENST00000397036 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
MCF2L-209ENST00000397036 DOCK2Q92608 1830 aa16.3■□□□□ 0.2
MCF2L-209ENST00000397036 GPAA1O43292 621 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 GNAT2P19087 354 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 CHAF1AQ13111 956 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-209ENST00000397036 ALX1Q15699 326 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 SNX21Q969T3 373 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 STRBPQ96SI9 672 aaKnown RBP16.29■□□□□ 0.2
MCF2L-209ENST00000397036 RIMBP2O15034 1052 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
MCF2L-209ENST00000397036 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-209ENST00000397036 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-209ENST00000397036 TM6SF1Q9BZW5 370 aa16.29■□□□□ 0.2
MCF2L-209ENST00000397036 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms