RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 GGA1Q9UJY5 639 aa13.95□□□□□ -0.18
ATN1-202ENST00000396684 RBM6P78332 1123 aaKnown RBP13.95□□□□□ -0.18
ATN1-202ENST00000396684 ANTXR1Q9H6X2 564 aa13.95□□□□□ -0.18
ATN1-202ENST00000396684 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 PDE6AP16499 860 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.182e-9■■□□□ 13.9
ATN1-202ENST00000396684 TPM4P67936 248 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 ESR2Q92731 530 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 USP42Q9H9J4 1324 aaKnown RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 MARCH6O60337 910 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 MSNP26038 577 aaKnown RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 RFX5P48382 616 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 ZMYM1Q5SVZ6 1142 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ME1P48163 572 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
ATN1-202ENST00000396684 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
ATN1-202ENST00000396684 LETM1O95202 739 aaPredicted RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 RC3H1Q5TC82 1133 aaKnown RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 WTAPQ15007 396 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 PI16Q6UXB8 463 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 TSPY2A6NKD2 308 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 NRDCO43847 1150 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 ADRA2BP18089 450 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 CCDC82Q8N4S0 544 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 JMYQ8N9B5 988 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATN1-202ENST00000396684 ZBTB43O43298 467 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 SERPINB2P05120 415 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
ATN1-202ENST00000396684 CATIPQ7Z7H3 387 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 GDPD2Q9HCC8 539 aa13.93□□□□□ -0.18
ATN1-202ENST00000396684 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
ATN1-202ENST00000396684 CSF1RP07333 972 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 WDR66Q8TBY9 1149 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 BECN2A8MW95 431 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
ATN1-202ENST00000396684 ZSWIM6Q9HCJ5 1215 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 TMOD2Q9NZR1 351 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 SLC4A8Q2Y0W8 1093 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 TMTC2Q8N394 836 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 EYA3Q99504 573 aa13.92□□□□□ -0.18
ATN1-202ENST00000396684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
ATN1-202ENST00000396684 DNTTIP2Q5QJE6 756 aaKnown RBP13.91□□□□□ -0.18
ATN1-202ENST00000396684 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
ATN1-202ENST00000396684 MAST3O60307 1309 aa13.91□□□□□ -0.18
ATN1-202ENST00000396684 SLC27A3Q5K4L6 730 aa13.91□□□□□ -0.18
ATN1-202ENST00000396684 CNTNAP4Q9C0A0 1308 aa13.91□□□□□ -0.18
ATN1-202ENST00000396684 CACNA1FO60840 1977 aa13.91□□□□□ -0.18
ATN1-202ENST00000396684 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 E7EWF7 191 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 F8W031 263 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 ADCK5Q3MIX3 580 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 HOOK1Q9UJC3 728 aaKnown RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 ROBO1Q9Y6N7 1651 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 RIPOR2Q9Y4F9 1068 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 SYT1P21579 422 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 BAG6P46379 1132 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 IKQ13123 557 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
ATN1-202ENST00000396684 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 ALS2Q96Q42 1657 aa13.9□□□□□ -0.18
ATN1-202ENST00000396684 B4E1Z4 1266 aa13.9□□□□□ -0.19
ATN1-202ENST00000396684 F13A1P00488 732 aa13.9□□□□□ -0.19
ATN1-202ENST00000396684 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.19
ATN1-202ENST00000396684 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
ATN1-202ENST00000396684 PLCG2P16885 1265 aa13.89□□□□□ -0.19
ATN1-202ENST00000396684 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms