RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 CDKL5O76039 1030 aa13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 PDE8BO95263 885 aa13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 SCARF1Q14162 830 aa13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 ELP1O95163 1332 aa13.52□□□□□ -0.25
PDXDC1-202ENST00000396410 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 ANO6Q4KMQ2 910 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 LPIN2Q92539 896 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 CCDC102BQ68D86 513 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 CSF1RP07333 972 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 ZNF532Q9HCE3 1301 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 TPM3P06753 285 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 CCDC144CPQ8IYA2 1237 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 MAGEB6Q8N7X4 407 aa13.51□□□□□ -0.25
PDXDC1-202ENST00000396410 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 MCAMP43121 646 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 RAI14Q9P0K7 980 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 PHKA1P46020 1223 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 COL18A1P39060 1754 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 A0A0G2JLW4 131 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
PDXDC1-202ENST00000396410 TPM2P07951 284 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 ZNF165P49910 485 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 RESTQ13127 1097 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■□□□□ 11.1
PDXDC1-202ENST00000396410 ARFGEF2Q9Y6D5 1785 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 TUBGCP6Q96RT7 1819 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 TMEM67Q5HYA8 995 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 CTAGE5O15320 804 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 TPM4P67936 248 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 PARP10Q53GL7 1025 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 SPATA5Q8NB90 893 aa13.49□□□□□ -0.25
PDXDC1-202ENST00000396410 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 NR1I2O75469 434 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 RXRAP19793 462 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 AKAP17AQ02040 695 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 OFD1O75665 1012 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 ADD2P35612 726 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 B4E1Z4 1266 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 MBD4O95243 580 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 PDE6AP16499 860 aa13.48□□□□□ -0.25
PDXDC1-202ENST00000396410 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SIK1P57059 783 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 ZBTB43O43298 467 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SLC4A4Q9Y6R1 1079 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 UBE3CQ15386 1083 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 ARMT1Q9H993 441 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
PDXDC1-202ENST00000396410 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 ALG1Q9BT22 464 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 JCADQ9P266 1359 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 TRIM22Q8IYM9 498 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms