RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GDAP1L1Q96MZ0 367 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.85
NDE1-202ENST00000396355 ANO6Q4KMQ2 910 aa9.71□□□□□ -0.85
NDE1-202ENST00000396355 PUF60Q9UHX1 559 aaKnown RBP9.71□□□□□ -0.85
NDE1-202ENST00000396355 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.85
NDE1-202ENST00000396355 USP16Q9Y5T5 823 aa9.71□□□□□ -0.85
NDE1-202ENST00000396355 CCDC69A6NI79 296 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 RANBP1P43487 201 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 STK11IPQ8N1F8 1099 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 USP26Q9BXU7 913 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 PTPRCP08575 1304 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 CCDC196A0A1B0GTZ2 297 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
NDE1-202ENST00000396355 RHOXF2BP0C7M4 288 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 RHOXF2Q9BQY4 288 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 DNAJC25Q9H1X3 360 aa9.71□□□□□ -0.86
NDE1-202ENST00000396355 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 NBPF11Q86T75 865 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 ANKRD7Q92527 254 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 EYA1Q99502 592 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.7□□□□□ -0.86
NDE1-202ENST00000396355 N4BP2Q86UW6 1770 aaPredicted RBP9.7□□□□□ -0.86
NDE1-202ENST00000396355 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 FBXW10Q5XX13 1052 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 KIAA1328Q86T90 577 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 FBXO18Q8NFZ0 1043 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 FLT4P35916 1363 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 SLIT2O94813 1529 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 MX1P20591 662 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 ACTN3Q08043 901 aaPredicted RBP9.7□□□□□ -0.86
NDE1-202ENST00000396355 TMC6Q7Z403 805 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 RPAP2Q8IXW5 612 aaPredicted RBP9.7□□□□□ -0.86
NDE1-202ENST00000396355 CAGE1Q8TC20 777 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
NDE1-202ENST00000396355 PPP1R12AO14974 1030 aaPredicted RBP9.69□□□□□ -0.86
NDE1-202ENST00000396355 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 IRF6O14896 467 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 IPO7O95373 1038 aaKnown RBP9.69□□□□□ -0.86
NDE1-202ENST00000396355 CCT5P48643 541 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 TSPYL4Q9UJ04 414 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 GOLGA6L7A0A1B0GV03 622 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 SERPINC1P01008 464 aa9.69□□□□□ -0.86
NDE1-202ENST00000396355 NOP2P46087 812 aaKnown RBP9.69□□□□□ -0.86
NDE1-202ENST00000396355 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
NDE1-202ENST00000396355 PXDNQ92626 1479 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 SETSIPP0DME0 302 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 ATRIPQ8WXE1 791 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 CCDC114Q96M63 670 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 SALL3Q9BXA9 1300 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 PAX7P23759 505 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 NEDD9Q14511 834 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 SYT17Q9BSW7 474 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 KCNQ4P56696 695 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 HSP90AA4PQ58FG1 418 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 FAM200AQ8TCP9 573 aa9.68□□□□□ -0.86
NDE1-202ENST00000396355 NEFHP12036 1026 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 IL2RBP14784 551 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 EXOC6BQ9Y2D4 811 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 RSRC1Q96IZ7 334 aaKnown RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 TACO1Q9BSH4 297 aaKnown RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 MTFR1LQ9H019 292 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 SH3BP1Q9Y3L3 701 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 USP54Q70EL1 1684 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 CYP2E1P05181 493 aaPredicted RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 ZSCAN25Q6NSZ9 544 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 NFXL1Q6ZNB6 911 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
NDE1-202ENST00000396355 ZBTB10Q96DT7 871 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 LTN1O94822 1766 aa9.67□□□□□ -0.86
NDE1-202ENST00000396355 MMP14P50281 582 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 CLEC17AQ6ZS10 378 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
NDE1-202ENST00000396355 TBC1D31Q96DN5 1066 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
NDE1-202ENST00000396355 CACNA1FO60840 1977 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms