RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
VCPKMT-202ENST00000395860 ZSCAN25Q6NSZ9 544 aa24.62■■□□□ 1.53
VCPKMT-202ENST00000395860 IDH1O75874 414 aaKnown RBP24.62■■□□□ 1.53
VCPKMT-202ENST00000395860 CHGBP05060 677 aa24.62■■□□□ 1.53
VCPKMT-202ENST00000395860 WASHC4Q2M389 1173 aa24.62■■□□□ 1.53
VCPKMT-202ENST00000395860 KCNA3P22001 575 aa24.61■■□□□ 1.53
VCPKMT-202ENST00000395860 RBM25P49756 843 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-202ENST00000395860 PPP1R1BQ9UD71 204 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-202ENST00000395860 PDS5AQ29RF7 1337 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-202ENST00000395860 PTGER2P43116 358 aa24.6■■□□□ 1.53
VCPKMT-202ENST00000395860 MCMDC2Q4G0Z9 681 aa24.6■■□□□ 1.53
VCPKMT-202ENST00000395860 HELLSQ9NRZ9 838 aa24.6■■□□□ 1.53
VCPKMT-202ENST00000395860 ZBTB22O15209 634 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 MAP3K12Q12852 859 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 ZMYM1Q5SVZ6 1142 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 CC2D2BQ6DHV5 1058 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 KLHL34Q8N239 644 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 BRCA1P38398 1863 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 EPB41L2O43491 1005 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 SLFNL1Q499Z3 407 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 TDRD7Q8NHU6 1098 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 C7orf43Q8WVR3 580 aa24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 SEC62Q99442 399 aaKnown RBP24.59■■□□□ 1.53
VCPKMT-202ENST00000395860 RIMBP2O15034 1052 aa24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 SLC9C2Q5TAH2 1124 aa24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 EYA3Q99504 573 aa24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 ZC3H12CQ9C0D7 883 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 CD209Q9NNX6 404 aa24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 LRP2BPQ9P2M1 347 aa24.58■■□□□ 1.53
VCPKMT-202ENST00000395860 CCDC88AQ3V6T2 1871 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 C21orf2O43822 256 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 ADD2P35612 726 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 CHAF1AQ13111 956 aaPredicted RBP24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 LSG1Q9H089 658 aaKnown RBP24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 ABCF2Q9UG63 623 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 CD2APQ9Y5K6 639 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 ZNF589Q86UQ0 364 aaPredicted RBP24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 PIM2Q9P1W9 311 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 WWC3Q9ULE0 1092 aa24.57■■□□□ 1.52
VCPKMT-202ENST00000395860 MCCP23508 829 aa24.56■■□□□ 1.52
VCPKMT-202ENST00000395860 APPBP2Q92624 585 aa24.56■■□□□ 1.52
VCPKMT-202ENST00000395860 SPON1Q9HCB6 807 aa24.56■■□□□ 1.52
VCPKMT-202ENST00000395860 IL1R1P14778 569 aa24.55■■□□□ 1.52
VCPKMT-202ENST00000395860 PDE6AP16499 860 aa24.55■■□□□ 1.52
VCPKMT-202ENST00000395860 UBE3CQ15386 1083 aa24.55■■□□□ 1.52
VCPKMT-202ENST00000395860 CCDC129Q6ZRS4 1044 aa24.55■■□□□ 1.52
VCPKMT-202ENST00000395860 CCDC171Q6TFL3 1326 aa24.55■■□□□ 1.52
VCPKMT-202ENST00000395860 MAST3O60307 1309 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 GRIPAP1Q4V328 841 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 MAGEB6Q8N7X4 407 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 OSBP2Q969R2 916 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 ZNF532Q9HCE3 1301 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 SNED1Q8TER0 1413 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 PTH1RQ03431 593 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 COA1Q9GZY4 146 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 RAI14Q9P0K7 980 aa24.54■■□□□ 1.52
VCPKMT-202ENST00000395860 MAST2Q6P0Q8 1798 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 CHD4Q14839 1912 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 M0R2C6 588 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 CCDC93Q567U6 631 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 WDR66Q8TBY9 1149 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 JAG2Q9Y219 1238 aa24.53■■□□□ 1.52
VCPKMT-202ENST00000395860 G3V3G9 751 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 DCAF8Q5TAQ9 597 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 ERICH6Q7L0X2 663 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 ZGPATQ8N5A5 531 aaKnown RBP24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 SUPT20HQ8NEM7 779 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 TCRBV5S4A2TA0A5A2 114 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 RTKN2Q8IZC4 609 aa24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 PUS7LQ9H0K6 701 aaKnown RBP24.52■■□□□ 1.52
VCPKMT-202ENST00000395860 SALL1Q9NSC2 1324 aa24.51■■□□□ 1.51
VCPKMT-202ENST00000395860 DALRD3Q5D0E6 543 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-202ENST00000395860 HSPA4P34932 840 aa24.5■■□□□ 1.51
VCPKMT-202ENST00000395860 SOGA3Q5TF21 947 aa24.5■■□□□ 1.51
VCPKMT-202ENST00000395860 SPTY2D1Q68D10 685 aaPredicted RBP24.5■■□□□ 1.51
VCPKMT-202ENST00000395860 MAP4K1Q92918 833 aa24.5■■□□□ 1.51
VCPKMT-202ENST00000395860 DOK7Q18PE1 504 aa24.49■■□□□ 1.51
VCPKMT-202ENST00000395860 KIF2CQ99661 725 aa24.49■■□□□ 1.51
VCPKMT-202ENST00000395860 GPAA1O43292 621 aa24.48■■□□□ 1.51
VCPKMT-202ENST00000395860 RBM8AQ9Y5S9 174 aaKnown RBP24.48■■□□□ 1.51
VCPKMT-202ENST00000395860 CYP7A1P22680 504 aa24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 PRDX5P30044 214 aa24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 NAA16Q6N069 864 aaPredicted RBP24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 DDRGK1Q96HY6 314 aa24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 AIDAQ96BJ3 306 aa24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 PSMD1Q99460 953 aa24.47■■□□□ 1.51
VCPKMT-202ENST00000395860 FAM205AQ6ZU69 1335 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 IGSF3O75054 1194 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 ANAPC15P60006 121 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 MECOMQ03112 1051 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 AOC3Q16853 763 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 VPS53Q5VIR6 699 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 TBC1D22AQ8WUA7 517 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 NSUN4Q96CB9 384 aaKnown RBP24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 DSCC1Q9BVC3 393 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 DBNDD1Q9H9R9 158 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 PALD1Q9ULE6 856 aa24.46■■□□□ 1.51
VCPKMT-202ENST00000395860 FER1L6Q2WGJ9 1857 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms