RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 GNAI1P63096 354 aa17.35■□□□□ 0.37
CHCHD2-201ENST00000395422 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
CHCHD2-201ENST00000395422 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
CHCHD2-201ENST00000395422 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
CHCHD2-201ENST00000395422 PPP2R3BQ9Y5P8 575 aa17.35■□□□□ 0.37
CHCHD2-201ENST00000395422 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 APAF1O14727 1248 aa17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 CHRNDQ07001 517 aa17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 PRMT6Q96LA8 375 aaPredicted RBP17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
CHCHD2-201ENST00000395422 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.37
CHCHD2-201ENST00000395422 SPDYE2BA6NHP3 402 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 SPDYE6P0CI01 402 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 CASP7P55210 303 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 SP3Q02447 781 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 G2E3Q7L622 706 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 ZNF333Q96JL9 665 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
CHCHD2-201ENST00000395422 UNCXA6NJT0 531 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 CSF1RP07333 972 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 KCNJ4P48050 445 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
CHCHD2-201ENST00000395422 TAF5LO75529 589 aa17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 RASA3Q14644 834 aa17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 MS4A4AQ96JQ5 239 aa17.31■□□□□ 0.36
CHCHD2-201ENST00000395422 GCKRQ14397 625 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 ELP3Q9H9T3 547 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 PTCH2Q9Y6C5 1203 aa17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 RBBP6Q7Z6E9 1792 aaKnown RBP17.3■□□□□ 0.36
CHCHD2-201ENST00000395422 IL1R1P14778 569 aa17.29■□□□□ 0.36
CHCHD2-201ENST00000395422 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
CHCHD2-201ENST00000395422 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
CHCHD2-201ENST00000395422 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
CHCHD2-201ENST00000395422 LAMB1P07942 1786 aa17.28■□□□□ 0.36
CHCHD2-201ENST00000395422 MYO1BO43795 1136 aa17.28■□□□□ 0.36
CHCHD2-201ENST00000395422 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
CHCHD2-201ENST00000395422 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
CHCHD2-201ENST00000395422 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
CHCHD2-201ENST00000395422 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
CHCHD2-201ENST00000395422 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
CHCHD2-201ENST00000395422 RANBP2P49792 3224 aaKnown RBP17.27■□□□□ 0.36
CHCHD2-201ENST00000395422 H0YGN5 161 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 OTUD5Q96G74 571 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 TEPSINQ96N21 525 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
CHCHD2-201ENST00000395422 MYH3P11055 1940 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 ARHGAP39Q9C0H5 1083 aa17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
CHCHD2-201ENST00000395422 CCL15-CCL14A0A0B4J2E2 113 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 FOXO4P98177 505 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 VGLL4Q14135 290 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 CCL15Q16663 113 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 SH3TC2Q8TF17 1288 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 TDRD3Q9H7E2 651 aaKnown RBP17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 ZFYVE28Q9HCC9 887 aa17.24■□□□□ 0.35
CHCHD2-201ENST00000395422 FLIIQ13045 1269 aa17.23■□□□□ 0.35
CHCHD2-201ENST00000395422 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
CHCHD2-201ENST00000395422 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
CHCHD2-201ENST00000395422 GTF2A2P52657 109 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 LINS1Q8NG48 757 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.22■□□□□ 0.354e-34■■□□□ 11.8
CHCHD2-201ENST00000395422 DNAAF4Q8WXU2 420 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 TTF2Q9UNY4 1162 aaKnown RBP17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 OTOFQ9HC10 1997 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
CHCHD2-201ENST00000395422 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 TCP10L2B9ZVM9 353 aa17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
CHCHD2-201ENST00000395422 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms