RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
HLA-DRA-202ENST00000395388 YDJCA8MPS7 323 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 ARID4AP29374 1257 aaPredicted RBP15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 CXCL9Q07325 125 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 TTC41PQ6P2S7 1318 aa15.31■□□□□ 0.04
HLA-DRA-202ENST00000395388 ATP5JP18859 108 aa15.3■□□□□ 0.04
HLA-DRA-202ENST00000395388 MX1P20591 662 aa15.3■□□□□ 0.04
HLA-DRA-202ENST00000395388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
HLA-DRA-202ENST00000395388 ARAP2Q8WZ64 1704 aa15.3■□□□□ 0.04
HLA-DRA-202ENST00000395388 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
HLA-DRA-202ENST00000395388 FAM205AQ6ZU69 1335 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 MYO3BQ8WXR4 1341 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 PSMD14O00487 310 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 VIL1P09327 827 aaKnown RBP15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 GPC2Q8N158 579 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 SPATA5Q8NB90 893 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 KCNQ5Q9NR82 932 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 SRCAPQ6ZRS2 3230 aa15.29■□□□□ 0.04
HLA-DRA-202ENST00000395388 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 MCAMP43121 646 aa15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 FKBP1AP62942 108 aaKnown RBP15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
HLA-DRA-202ENST00000395388 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 GLTPD2A6NH11 291 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 RPS12P25398 132 aaKnown RBP15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 PDE1AP54750 535 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 TTF1Q15361 905 aaPredicted RBP15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 MFSD14BQ5SR56 506 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 DACT2Q5SW24 774 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 AGBL3Q8NEM8 1001 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 DNAJC2Q99543 621 aaKnown RBP15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 ABCF2Q9UG63 623 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 STAP2Q9UGK3 403 aa15.27■□□□□ 0.04
HLA-DRA-202ENST00000395388 COL4A5P29400 1685 aa15.27■□□□□ 0.03
HLA-DRA-202ENST00000395388 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 LMOD1P29536 600 aaPredicted RBP15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 ZAP70P43403 619 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 SCARF1Q14162 830 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 PLEKHM2Q8IWE5 1019 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
HLA-DRA-202ENST00000395388 AOX1Q06278 1338 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 H7C1D1 291 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 LDHBP07195 334 aaKnown RBP15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 MMP14P50281 582 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 DPF2Q92785 391 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 HAUS7Q99871 368 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
HLA-DRA-202ENST00000395388 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 SALL1Q9NSC2 1324 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 IGSF3O75054 1194 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 PDE4AP27815 886 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 TSHZ3Q63HK5 1081 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 MXD3Q9BW11 206 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
HLA-DRA-202ENST00000395388 MAST3O60307 1309 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 GOLIM4O00461 696 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 USP17L8P0C7I0 530 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 LRRFIP1Q32MZ4 808 aaKnown RBP15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 KIAA0825Q8IV33 1275 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 PI4K2BQ8TCG2 481 aa15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 CNOT7Q9UIV1 285 aaKnown RBP15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 TTF2Q9UNY4 1162 aaKnown RBP15.23■□□□□ 0.03
HLA-DRA-202ENST00000395388 SCN9AQ15858 1988 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 IQCA1LA6NCM1 817 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 RGS3P49796 1198 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 DZIP1Q86YF9 867 aaKnown RBP15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 PSME4Q14997 1843 aa15.22■□□□□ 0.03
HLA-DRA-202ENST00000395388 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
HLA-DRA-202ENST00000395388 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
HLA-DRA-202ENST00000395388 LDHCP07864 332 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms