RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
PFDN6-205ENST00000395134 CCDC181Q5TID7 509 aa11.58□□□□□ -0.56
PFDN6-205ENST00000395134 CRELD1Q96HD1 420 aa11.58□□□□□ -0.56
PFDN6-205ENST00000395134 STIM2Q9P246 746 aa11.58□□□□□ -0.56
PFDN6-205ENST00000395134 CHD4Q14839 1912 aa11.58□□□□□ -0.56
PFDN6-205ENST00000395134 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 PLSCR1O15162 318 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 FGRP09769 529 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 IL2RBP14784 551 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 PSEN2P49810 448 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 KLHL42Q9P2K6 505 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 RIPOR2Q9Y4F9 1068 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 PCDHGB7Q9Y5F8 929 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 AK5Q9Y6K8 562 aa11.57□□□□□ -0.56
PFDN6-205ENST00000395134 BCL9O00512 1426 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 CTSHP09668 335 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 MSS51Q4VC12 460 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 SH3RF1Q7Z6J0 888 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 FRMD6Q96NE9 622 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 TESK2Q96S53 571 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 PSMD1Q99460 953 aa11.56□□□□□ -0.56
PFDN6-205ENST00000395134 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
PFDN6-205ENST00000395134 LOC102724159A0A0B4J2E5 919 aa11.55□□□□□ -0.56
PFDN6-205ENST00000395134 MAGEB6P1A0A0J9YX57 407 aa11.55□□□□□ -0.56
PFDN6-205ENST00000395134 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
PFDN6-205ENST00000395134 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
PFDN6-205ENST00000395134 PWP2Q15269 919 aaKnown RBP11.55□□□□□ -0.56
PFDN6-205ENST00000395134 MRFAP1L1Q96HT8 127 aa11.55□□□□□ -0.56
PFDN6-205ENST00000395134 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
PFDN6-205ENST00000395134 MRPL42Q9Y6G3 142 aaKnown RBP11.55□□□□□ -0.56
PFDN6-205ENST00000395134 USP47Q96K76 1375 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 NR1I2O75469 434 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.561e-7■□□□□ 9.6
PFDN6-205ENST00000395134 LY75O60449 1722 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
PFDN6-205ENST00000395134 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
PFDN6-205ENST00000395134 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 TMEM229AB2RXF0 380 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 TNFRSF10BO14763 440 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
PFDN6-205ENST00000395134 XRCC5P13010 732 aaKnown RBP11.53□□□□□ -0.56
PFDN6-205ENST00000395134 MMP16P51512 607 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 RRS1Q15050 365 aaKnown RBP11.53□□□□□ -0.56
PFDN6-205ENST00000395134 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 DDX54Q8TDD1 881 aaKnown RBP11.53□□□□□ -0.56
PFDN6-205ENST00000395134 COG3Q96JB2 828 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 MEGF6O75095 1541 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 ITGB4P16144 1822 aa11.53□□□□□ -0.56
PFDN6-205ENST00000395134 YY1P25490 414 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 AMPHP49418 695 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 KCNQ4P56696 695 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 ZNF827Q17R98 1081 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 IP6K1Q92551 441 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.57
PFDN6-205ENST00000395134 ZFRQ96KR1 1074 aaKnown RBP11.52□□□□□ -0.57
PFDN6-205ENST00000395134 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 CEP350Q5VT06 3117 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 ANKRD36BQ8N2N9 1353 aa11.52□□□□□ -0.57
PFDN6-205ENST00000395134 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
PFDN6-205ENST00000395134 HOXC9P31274 260 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 GJA8P48165 433 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 COX20Q5RI15 118 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 HS2ST1Q7LGA3 356 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 TNS4Q8IZW8 715 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
PFDN6-205ENST00000395134 TOGARAM1Q9Y4F4 1720 aa11.5□□□□□ -0.57
PFDN6-205ENST00000395134 BACH1O14867 736 aa11.5□□□□□ -0.57
PFDN6-205ENST00000395134 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
PFDN6-205ENST00000395134 FAM160A2Q8N612 972 aaPredicted RBP11.5□□□□□ -0.57
PFDN6-205ENST00000395134 SLC10A4Q96EP9 437 aa11.5□□□□□ -0.57
PFDN6-205ENST00000395134 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
PFDN6-205ENST00000395134 TAF1LQ8IZX4 1826 aa11.5□□□□□ -0.57
PFDN6-205ENST00000395134 K7ELQ4 463 aaPredicted RBP11.49□□□□□ -0.57
PFDN6-205ENST00000395134 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 CKAP2LQ8IYA6 745 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 GJD3Q8N144 294 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
PFDN6-205ENST00000395134 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 C5P01031 1676 aa11.49□□□□□ -0.57
PFDN6-205ENST00000395134 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
PFDN6-205ENST00000395134 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
PFDN6-205ENST00000395134 ENPP3O14638 875 aa11.48□□□□□ -0.57
PFDN6-205ENST00000395134 TPD52L2O43399 206 aaKnown RBP11.48□□□□□ -0.57
PFDN6-205ENST00000395134 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
PFDN6-205ENST00000395134 TMF1P82094 1093 aa11.48□□□□□ -0.57
PFDN6-205ENST00000395134 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
PFDN6-205ENST00000395134 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
PFDN6-205ENST00000395134 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms