RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 IREB2P48200 963 aaKnown RBP25.2■■□□□ 1.62
UPK3B-203ENST00000394849 GCKRQ14397 625 aa25.2■■□□□ 1.62
UPK3B-203ENST00000394849 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
UPK3B-203ENST00000394849 PTPN22Q9Y2R2 807 aa25.2■■□□□ 1.62
UPK3B-203ENST00000394849 KIAA0100Q14667 2235 aaKnown RBP25.2■■□□□ 1.62
UPK3B-203ENST00000394849 IGF2BP3O00425 579 aaKnown RBP eCLIP25.19■■□□□ 1.62
UPK3B-203ENST00000394849 CHRNDQ07001 517 aa25.19■■□□□ 1.62
UPK3B-203ENST00000394849 HABP4Q5JVS0 413 aaKnown RBP25.19■■□□□ 1.62
UPK3B-203ENST00000394849 ARMC5Q96C12 935 aa25.18■■□□□ 1.62
UPK3B-203ENST00000394849 CENPFP49454 3210 aa25.18■■□□□ 1.62
UPK3B-203ENST00000394849 ANKRD18BA2A2Z9 1011 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 POTEFA5A3E0 1075 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 SPDYE2BA6NHP3 402 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 SPDYE6P0CI01 402 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 ARHGEF6Q15052 776 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 ZNF804AQ7Z570 1209 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 ANKRD13AQ8IZ07 590 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 CLMNQ96JQ2 1002 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 EFCC1Q9HA90 598 aa25.17■■□□□ 1.62
UPK3B-203ENST00000394849 SSC5DA1L4H1 1573 aa25.16■■□□□ 1.62
UPK3B-203ENST00000394849 IL1R1P14778 569 aa25.16■■□□□ 1.62
UPK3B-203ENST00000394849 CERS5Q8N5B7 392 aa25.16■■□□□ 1.62
UPK3B-203ENST00000394849 FZD1Q9UP38 647 aa25.16■■□□□ 1.62
UPK3B-203ENST00000394849 TESPA1A2RU30 521 aaPredicted RBP25.15■■□□□ 1.62
UPK3B-203ENST00000394849 SLC4A2P04920 1241 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 SP3Q02447 781 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 CRHR2Q13324 411 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 TNFAIP1Q13829 316 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 CFAP100Q494V2 611 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 LINS1Q8NG48 757 aa25.15■■□□□ 1.62
UPK3B-203ENST00000394849 CACNA1FO60840 1977 aa25.14■■□□□ 1.62
UPK3B-203ENST00000394849 CASP7P55210 303 aa25.14■■□□□ 1.62
UPK3B-203ENST00000394849 PRKRIP1Q9H875 184 aaPredicted RBP25.14■■□□□ 1.62
UPK3B-203ENST00000394849 IRS2Q9Y4H2 1338 aa25.13■■□□□ 1.61
UPK3B-203ENST00000394849 USP2O75604 605 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-203ENST00000394849 IFIT5Q13325 482 aaKnown RBP25.13■■□□□ 1.61
UPK3B-203ENST00000394849 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-203ENST00000394849 CD99L2Q8TCZ2 262 aa25.13■■□□□ 1.61
UPK3B-203ENST00000394849 PRMT6Q96LA8 375 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-203ENST00000394849 VEZTQ9HBM0 779 aa25.13■■□□□ 1.61
UPK3B-203ENST00000394849 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.13■■□□□ 1.61
UPK3B-203ENST00000394849 CLRN2A0PK11 232 aa25.12■■□□□ 1.61
UPK3B-203ENST00000394849 ZNF316A6NFI3 1004 aaPredicted RBP25.12■■□□□ 1.61
UPK3B-203ENST00000394849 NBPF12Q5TAG4 269 aaPredicted RBP25.12■■□□□ 1.61
UPK3B-203ENST00000394849 DNAAF4Q8WXU2 420 aa25.12■■□□□ 1.61
UPK3B-203ENST00000394849 TMEM106CQ9BVX2 250 aa25.12■■□□□ 1.61
UPK3B-203ENST00000394849 F8W031 263 aaPredicted RBP25.11■■□□□ 1.61
UPK3B-203ENST00000394849 FLIIQ13045 1269 aa25.11■■□□□ 1.61
UPK3B-203ENST00000394849 RASA3Q14644 834 aa25.11■■□□□ 1.61
UPK3B-203ENST00000394849 G2E3Q7L622 706 aa25.11■■□□□ 1.61
UPK3B-203ENST00000394849 NBPF11Q86T75 865 aa25.11■■□□□ 1.61
UPK3B-203ENST00000394849 TAF5LO75529 589 aa25.1■■□□□ 1.61
UPK3B-203ENST00000394849 RBM5P52756 815 aaKnown RBP eCLIP25.1■■□□□ 1.61
UPK3B-203ENST00000394849 CCDC27Q2M243 656 aa25.1■■□□□ 1.61
UPK3B-203ENST00000394849 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
UPK3B-203ENST00000394849 GJA5P36382 358 aa25.09■■□□□ 1.61
UPK3B-203ENST00000394849 FKBP5Q13451 457 aaPredicted RBP25.09■■□□□ 1.61
UPK3B-203ENST00000394849 PTPN18Q99952 460 aa25.09■■□□□ 1.61
UPK3B-203ENST00000394849 OPTNQ96CV9 577 aa25.08■■□□□ 1.61
UPK3B-203ENST00000394849 SERPINA10Q9UK55 444 aa25.08■■□□□ 1.61
UPK3B-203ENST00000394849 PCDHAC2Q9Y5I4 1007 aa25.08■■□□□ 1.61
UPK3B-203ENST00000394849 A0A1B0GUL6 1792 aa25.08■■□□□ 1.6
UPK3B-203ENST00000394849 WDHD1O75717 1129 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-203ENST00000394849 EN2P19622 333 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-203ENST00000394849 HELBQ8NG08 1087 aaPredicted RBP25.07■■□□□ 1.6
UPK3B-203ENST00000394849 FAM205AQ6ZU69 1335 aa25.07■■□□□ 1.6
UPK3B-203ENST00000394849 SNAP23O00161 211 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 GTF2A2P52657 109 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 SPDYE2Q495Y8 402 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 ZNF333Q96JL9 665 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 MS4A4AQ96JQ5 239 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 ZFYVE28Q9HCC9 887 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 IL16Q14005 1332 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 BRCA2P51587 3418 aa25.06■■□□□ 1.6
UPK3B-203ENST00000394849 SLC9C1Q4G0N8 1177 aa25.05■■□□□ 1.6
UPK3B-203ENST00000394849 ELP3Q9H9T3 547 aa25.05■■□□□ 1.6
UPK3B-203ENST00000394849 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
UPK3B-203ENST00000394849 TNNI2P48788 182 aa25.04■■□□□ 1.6
UPK3B-203ENST00000394849 FOXO4P98177 505 aa25.04■■□□□ 1.6
UPK3B-203ENST00000394849 CCDC57Q2TAC2 916 aa25.04■■□□□ 1.6
UPK3B-203ENST00000394849 ZNF70Q9UC06 446 aaPredicted RBP25.04■■□□□ 1.6
UPK3B-203ENST00000394849 CHMP3Q9Y3E7 222 aa25.04■■□□□ 1.6
UPK3B-203ENST00000394849 TAF1CQ15572 869 aaPredicted RBP25.03■■□□□ 1.6
UPK3B-203ENST00000394849 NCBP3Q53F19 620 aaKnown RBP25.03■■□□□ 1.6
UPK3B-203ENST00000394849 TAF7LQ5H9L4 462 aa25.03■■□□□ 1.6
UPK3B-203ENST00000394849 MFSD14BQ5SR56 506 aa25.03■■□□□ 1.6
UPK3B-203ENST00000394849 LDHAL6AQ6ZMR3 332 aa25.03■■□□□ 1.6
UPK3B-203ENST00000394849 WWC1Q8IX03 1113 aa25.03■■□□□ 1.6
UPK3B-203ENST00000394849 MAP3K9P80192 1104 aa25.02■■□□□ 1.6
UPK3B-203ENST00000394849 ZCCHC17Q9NP64 241 aaKnown RBP25.02■■□□□ 1.6
UPK3B-203ENST00000394849 TTF2Q9UNY4 1162 aaKnown RBP25.02■■□□□ 1.6
UPK3B-203ENST00000394849 CSADQ9Y600 493 aa25.02■■□□□ 1.6
UPK3B-203ENST00000394849 CCL15-CCL14A0A0B4J2E2 113 aa25.01■■□□□ 1.59
UPK3B-203ENST00000394849 FXR1P51114 621 aaKnown RBP eCLIP25.01■■□□□ 1.59
UPK3B-203ENST00000394849 UBE4AQ14139 1066 aa25.01■■□□□ 1.59
UPK3B-203ENST00000394849 CCL15Q16663 113 aa25.01■■□□□ 1.59
UPK3B-203ENST00000394849 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.01■■□□□ 1.59
UPK3B-203ENST00000394849 TDRD7Q8NHU6 1098 aaKnown RBP25.01■■□□□ 1.59
UPK3B-203ENST00000394849 CNNM1Q9NRU3 951 aa25.01■■□□□ 1.59
UPK3B-203ENST00000394849 GNRH1P01148 92 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms