RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	TOB2	Q14106	344 aa	Predicted RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	SF3B3	Q15393	1217 aa	Known RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	ME3	Q16798	604 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	SLC10A5	Q5PT55	438 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	CCDC129	Q6ZRS4	1044 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	SEC62	Q99442	399 aa	Known RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	MPHOSPH8	Q99549	860 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	TMEM106C	Q9BVX2	250 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	AGXT2	Q9BYV1	514 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	NARF	Q9UHQ1	456 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	NDUFB9	Q9Y6M9	179 aa		10.96	□□□□□ -0.65
MITF-205	ENST00000394348	DDX49	Q9Y6V7	483 aa	Known RBP	10.96	□□□□□ -0.65
MITF-205	ENST00000394348	ECM2	O94769	699 aa	Predicted RBP	10.95	□□□□□ -0.66
MITF-205	ENST00000394348	LARGE1	O95461	756 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CPA1	P15085	419 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	SYT1	P21579	422 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	ADD2	P35612	726 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	MCAM	P43121	646 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	ZAP70	P43403	619 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CSPP1	Q1MSJ5	1256 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CCDC102B	Q68D86	513 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	DHX32	Q7L7V1	743 aa	Known RBP	10.95	□□□□□ -0.66
MITF-205	ENST00000394348	OSBP2	Q969R2	916 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.95	□□□□□ -0.66
MITF-205	ENST00000394348	LLPH	Q9BRT6	129 aa	Known RBP	10.95	□□□□□ -0.66
MITF-205	ENST00000394348	TPCN1	Q9ULQ1	816 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CASZ1	Q86V15	1759 aa		10.95	□□□□□ -0.66
MITF-205	ENST00000394348	CARMIL3	Q8ND23	1372 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348		M0R2C6	588 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	HCLS1	P14317	486 aa	Predicted RBP	10.94	□□□□□ -0.66
MITF-205	ENST00000394348	GJB2	P29033	226 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	ZNF445	P59923	1031 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	ST3GAL1	Q11201	340 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	SCARF1	Q14162	830 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	CCDC83	Q8IWF9	413 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	CERK	Q8TCT0	537 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	GTF3C6	Q969F1	213 aa		10.94	□□□□□ -0.66
MITF-205	ENST00000394348	GJD4	Q96KN9	370 aa	Predicted RBP	10.94	□□□□□ -0.66
MITF-205	ENST00000394348	C4B	P0C0L5	1744 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	IGSF3	O75054	1194 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	F13A1	P00488	732 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	EVC	P57679	992 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	EXOSC10	Q01780	885 aa	Known RBP	10.93	□□□□□ -0.66
MITF-205	ENST00000394348	ALX1	Q15699	326 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	IMMT	Q16891	758 aa	Known RBP	10.93	□□□□□ -0.66
MITF-205	ENST00000394348	TMED8	Q6PL24	325 aa	Predicted RBP	10.93	□□□□□ -0.66
MITF-205	ENST00000394348	RGS22	Q8NE09	1264 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	RNF25	Q96BH1	459 aa	Predicted RBP	10.93	□□□□□ -0.66
MITF-205	ENST00000394348	TRPC5	Q9UL62	973 aa	Predicted RBP	10.93	□□□□□ -0.66
MITF-205	ENST00000394348	MTMR6	Q9Y217	621 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	TAF6L	Q9Y6J9	622 aa		10.93	□□□□□ -0.66
MITF-205	ENST00000394348	C4A	P0C0L4	1744 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	ZNF804B	A4D1E1	1349 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	PDS5A	Q29RF7	1337 aa	Known RBP	10.92	□□□□□ -0.66
MITF-205	ENST00000394348		E7EWF7	191 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	GPAA1	O43292	621 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	PFKFB2	O60825	505 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	PRPF40A	O75400	957 aa	Known RBP	10.92	□□□□□ -0.66
MITF-205	ENST00000394348	PHKA1	P46020	1223 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	UBE4A	Q14139	1066 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	WASHC4	Q2M389	1173 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	STOX1	Q6ZVD7	989 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	SYAP1	Q96A49	352 aa	Predicted RBP	10.92	□□□□□ -0.66
MITF-205	ENST00000394348	ZNF274	Q96GC6	653 aa	Predicted RBP	10.92	□□□□□ -0.66
MITF-205	ENST00000394348	BSDC1	Q9NW68	430 aa	Predicted RBP	10.92	□□□□□ -0.66
MITF-205	ENST00000394348	KIF3A	Q9Y496	699 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	TIAM2	Q8IVF5	1701 aa		10.92	□□□□□ -0.66
MITF-205	ENST00000394348	TCRBV5S4A2T	A0A5A2	114 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	FOXP2	O15409	715 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	CHGB	P05060	677 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	PDE6A	P16499	860 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	NCL	P19338	710 aa	Known RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	PSEN1	P49768	467 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	HMGN5	P82970	282 aa	Known RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	MAP3K12	Q12852	859 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	PDAP1	Q13442	181 aa	Known RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	MEX3C	Q5U5Q3	659 aa	Known RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348		Q6ZUG5	572 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	ANKRD18A	Q8IVF6	992 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	SPATA5	Q8NB90	893 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	SMARCC2	Q8TAQ2	1214 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	GZF1	Q9H116	711 aa	Predicted RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	BCL2L12	Q9HB09	334 aa		10.91	□□□□□ -0.66
MITF-205	ENST00000394348	CCNL1	Q9UK58	526 aa	Predicted RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	RTCB	Q9Y3I0	505 aa	Known RBP	10.91	□□□□□ -0.66
MITF-205	ENST00000394348	AFF2	P51816	1311 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	PNPLA7	Q6ZV29	1317 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	SEMA3E	O15041	775 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	ZPR1	O75312	459 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	PHF14	O94880	888 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	GNAT2	P19087	354 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	CHRND	Q07001	517 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	ERFE	Q4G0M1	354 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	SLC9C2	Q5TAH2	1124 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	GPT2	Q8TD30	523 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	SETDB2	Q96T68	719 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.9	□□□□□ -0.66
MITF-205	ENST00000394348	PUS7L	Q9H0K6	701 aa	Known RBP	10.9	□□□□□ -0.66
MITF-205	ENST00000394348	GRPEL1	Q9HAV7	217 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	PIH1D3	Q9NQM4	214 aa	Known RBP	10.9	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms