RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 CLMNQ96JQ2 1002 aa25.45■■□□□ 1.66
POLR2J-202ENST00000393794 CHRNDQ07001 517 aa25.44■■□□□ 1.66
POLR2J-202ENST00000393794 PCDHAC2Q9Y5I4 1007 aa25.44■■□□□ 1.66
POLR2J-202ENST00000393794 TESPA1A2RU30 521 aaPredicted RBP25.43■■□□□ 1.66
POLR2J-202ENST00000393794 POTEFA5A3E0 1075 aa25.43■■□□□ 1.66
POLR2J-202ENST00000393794 FKBP1AP62942 108 aaKnown RBP25.43■■□□□ 1.66
POLR2J-202ENST00000393794 DLGAP5Q15398 846 aa25.43■■□□□ 1.66
POLR2J-202ENST00000393794 TRIM17Q9Y577 477 aa25.43■■□□□ 1.66
POLR2J-202ENST00000393794 SNAP23O00161 211 aa25.42■■□□□ 1.66
POLR2J-202ENST00000393794 IL1R1P14778 569 aa25.42■■□□□ 1.66
POLR2J-202ENST00000393794 GJA5P36382 358 aa25.42■■□□□ 1.66
POLR2J-202ENST00000393794 MPHOSPH8Q99549 860 aa25.42■■□□□ 1.66
POLR2J-202ENST00000393794 A0A1B0GUL6 1792 aa25.41■■□□□ 1.66
POLR2J-202ENST00000393794 AOX1Q06278 1338 aa25.41■■□□□ 1.66
POLR2J-202ENST00000393794 PPP1R12BO60237 982 aaPredicted RBP25.41■■□□□ 1.66
POLR2J-202ENST00000393794 CAP1Q01518 475 aa25.41■■□□□ 1.66
POLR2J-202ENST00000393794 ARMC5Q96C12 935 aa25.41■■□□□ 1.66
POLR2J-202ENST00000393794 PRMT6Q96LA8 375 aaPredicted RBP25.41■■□□□ 1.66
POLR2J-202ENST00000393794 PTPN22Q9Y2R2 807 aa25.41■■□□□ 1.66
POLR2J-202ENST00000393794 SPDYE2BA6NHP3 402 aa25.4■■□□□ 1.66
POLR2J-202ENST00000393794 USP2O75604 605 aaPredicted RBP25.4■■□□□ 1.66
POLR2J-202ENST00000393794 SPDYE6P0CI01 402 aa25.4■■□□□ 1.66
POLR2J-202ENST00000393794 HABP4Q5JVS0 413 aaKnown RBP25.4■■□□□ 1.66
POLR2J-202ENST00000393794 TSR2Q969E8 191 aaKnown RBP25.4■■□□□ 1.66
POLR2J-202ENST00000393794 PTPN18Q99952 460 aa25.4■■□□□ 1.66
POLR2J-202ENST00000393794 STK31Q9BXU1 1019 aa25.4■■□□□ 1.66
POLR2J-202ENST00000393794 SLC4A2P04920 1241 aa25.39■■□□□ 1.66
POLR2J-202ENST00000393794 CACNA1FO60840 1977 aa25.38■■□□□ 1.65
POLR2J-202ENST00000393794 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
POLR2J-202ENST00000393794 SUPT20HL1Q3ZLR7 823 aa25.38■■□□□ 1.65
POLR2J-202ENST00000393794 CFAP100Q494V2 611 aa25.38■■□□□ 1.65
POLR2J-202ENST00000393794 NBPF12Q5TAG4 269 aaPredicted RBP25.38■■□□□ 1.65
POLR2J-202ENST00000393794 ERO1AQ96HE7 468 aa25.38■■□□□ 1.65
POLR2J-202ENST00000393794 FLIIQ13045 1269 aa25.37■■□□□ 1.65
POLR2J-202ENST00000393794 CRHR2Q13324 411 aa25.37■■□□□ 1.65
POLR2J-202ENST00000393794 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
POLR2J-202ENST00000393794 LINS1Q8NG48 757 aa25.37■■□□□ 1.65
POLR2J-202ENST00000393794 TAF5LO75529 589 aa25.36■■□□□ 1.65
POLR2J-202ENST00000393794 FOXO4P98177 505 aa25.36■■□□□ 1.65
POLR2J-202ENST00000393794 ANKRD18BA2A2Z9 1011 aa25.35■■□□□ 1.65
POLR2J-202ENST00000393794 KCNJ4P48050 445 aa25.35■■□□□ 1.65
POLR2J-202ENST00000393794 CD99L2Q8TCZ2 262 aa25.35■■□□□ 1.65
POLR2J-202ENST00000393794 DNAAF4Q8WXU2 420 aa25.35■■□□□ 1.65
POLR2J-202ENST00000393794 MS4A4AQ96JQ5 239 aa25.35■■□□□ 1.65
POLR2J-202ENST00000393794 CLRN2A0PK11 232 aa25.34■■□□□ 1.65
POLR2J-202ENST00000393794 ANKRD13AQ8IZ07 590 aa25.34■■□□□ 1.65
POLR2J-202ENST00000393794 HELBQ8NG08 1087 aaPredicted RBP25.34■■□□□ 1.65
POLR2J-202ENST00000393794 MYH16Q9H6N6 1097 aa25.34■■□□□ 1.65
POLR2J-202ENST00000393794 OTOFQ9HC10 1997 aa25.34■■□□□ 1.65
POLR2J-202ENST00000393794 CEP290O15078 2479 aa25.34■■□□□ 1.65
POLR2J-202ENST00000393794 MYO1BO43795 1136 aa25.33■■□□□ 1.65
POLR2J-202ENST00000393794 IREB2P48200 963 aaKnown RBP25.33■■□□□ 1.65
POLR2J-202ENST00000393794 RASA3Q14644 834 aa25.33■■□□□ 1.65
POLR2J-202ENST00000393794 OTUD7BQ6GQQ9 843 aa25.33■■□□□ 1.65
POLR2J-202ENST00000393794 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
POLR2J-202ENST00000393794 FAM205AQ6ZU69 1335 aa25.33■■□□□ 1.64
POLR2J-202ENST00000393794 SP3Q02447 781 aa25.32■■□□□ 1.64
POLR2J-202ENST00000393794 TEPSINQ96N21 525 aa25.32■■□□□ 1.64
POLR2J-202ENST00000393794 EFCC1Q9HA90 598 aa25.32■■□□□ 1.64
POLR2J-202ENST00000393794 F8W031 263 aaPredicted RBP25.31■■□□□ 1.64
POLR2J-202ENST00000393794 EN2P19622 333 aaPredicted RBP25.31■■□□□ 1.64
POLR2J-202ENST00000393794 NCBP3Q53F19 620 aaKnown RBP25.31■■□□□ 1.64
POLR2J-202ENST00000393794 ZNF804AQ7Z570 1209 aa25.31■■□□□ 1.64
POLR2J-202ENST00000393794 IL16Q14005 1332 aa25.31■■□□□ 1.64
POLR2J-202ENST00000393794 IFIT5Q13325 482 aaKnown RBP25.3■■□□□ 1.64
POLR2J-202ENST00000393794 SPDYE2Q495Y8 402 aa25.3■■□□□ 1.64
POLR2J-202ENST00000393794 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.29■■□□□ 1.64
POLR2J-202ENST00000393794 TDRD7Q8NHU6 1098 aaKnown RBP25.29■■□□□ 1.64
POLR2J-202ENST00000393794 ZNF333Q96JL9 665 aa25.29■■□□□ 1.64
POLR2J-202ENST00000393794 VEZTQ9HBM0 779 aa25.29■■□□□ 1.64
POLR2J-202ENST00000393794 FKBP5Q13451 457 aaPredicted RBP25.28■■□□□ 1.64
POLR2J-202ENST00000393794 EPHA10Q5JZY3 1008 aa25.28■■□□□ 1.64
POLR2J-202ENST00000393794 BEND3Q5T5X7 828 aa25.28■■□□□ 1.64
POLR2J-202ENST00000393794 ZNF70Q9UC06 446 aaPredicted RBP25.28■■□□□ 1.64
POLR2J-202ENST00000393794 SERPINA10Q9UK55 444 aa25.28■■□□□ 1.64
POLR2J-202ENST00000393794 VAMP4O75379 141 aa25.27■■□□□ 1.64
POLR2J-202ENST00000393794 CDAN1Q8IWY9 1227 aa25.27■■□□□ 1.64
POLR2J-202ENST00000393794 BRI3BPQ8WY22 251 aa25.27■■□□□ 1.64
POLR2J-202ENST00000393794 OPTNQ96CV9 577 aa25.27■■□□□ 1.64
POLR2J-202ENST00000393794 FXR1P51114 621 aaKnown RBP eCLIP25.26■■□□□ 1.63
POLR2J-202ENST00000393794 ELP3Q9H9T3 547 aa25.26■■□□□ 1.63
POLR2J-202ENST00000393794 JAG2Q9Y219 1238 aa25.26■■□□□ 1.63
POLR2J-202ENST00000393794 SZT2Q5T011 3432 aa25.25■■□□□ 1.63
POLR2J-202ENST00000393794 TNFAIP1Q13829 316 aa25.25■■□□□ 1.63
POLR2J-202ENST00000393794 LMBR1LQ6UX01 489 aa25.25■■□□□ 1.63
POLR2J-202ENST00000393794 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.25■■□□□ 1.63
POLR2J-202ENST00000393794 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.24■■□□□ 1.63
POLR2J-202ENST00000393794 CNKSR2Q8WXI2 1034 aa25.24■■□□□ 1.63
POLR2J-202ENST00000393794 ZNF594Q96JF6 807 aaPredicted RBP25.24■■□□□ 1.63
POLR2J-202ENST00000393794 TDRD3Q9H7E2 651 aaKnown RBP25.24■■□□□ 1.63
POLR2J-202ENST00000393794 TRIOBPQ9H2D6 2365 aa25.23■■□□□ 1.63
POLR2J-202ENST00000393794 UBE4AQ14139 1066 aa25.23■■□□□ 1.63
POLR2J-202ENST00000393794 CCDC184Q52MB2 194 aa25.23■■□□□ 1.63
POLR2J-202ENST00000393794 FAM84BQ96KN1 310 aaPredicted RBP25.23■■□□□ 1.63
POLR2J-202ENST00000393794 ARAP2Q8WZ64 1704 aa25.23■■□□□ 1.63
POLR2J-202ENST00000393794 MAP3K9P80192 1104 aa25.22■■□□□ 1.63
POLR2J-202ENST00000393794 MFSD14BQ5SR56 506 aa25.22■■□□□ 1.63
POLR2J-202ENST00000393794 LDHAL6AQ6ZMR3 332 aa25.22■■□□□ 1.63
POLR2J-202ENST00000393794 DZIP1LQ8IYY4 767 aaKnown RBP25.22■■□□□ 1.63
POLR2J-202ENST00000393794 TTF2Q9UNY4 1162 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms