RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 IQSEC3Q9UPP2 1182 aaPredicted RBP23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-204ENST00000393546 ZNF280AP59817 542 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 TBC1D10BQ4KMP7 808 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 RBM26Q5T8P6 1007 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 SAMD7Q7Z3H4 446 aa23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 ERC1Q8IUD2 1116 aa23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 CRBNQ96SW2 442 aa23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 GPR108Q9NPR9 543 aa23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 JAG2Q9Y219 1238 aa23.44■■□□□ 1.34
PDLIM7-204ENST00000393546 ADORA1P30542 326 aa23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 TRPM4Q8TD43 1214 aa23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 XAGE2Q96GT9 111 aa23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 HDAC9Q9UKV0 1011 aa23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 EXOC6BQ9Y2D4 811 aa23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
PDLIM7-204ENST00000393546 HIRAP54198 1017 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-204ENST00000393546 CHAF1AQ13111 956 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-204ENST00000393546 GORABQ5T7V8 394 aa23.42■■□□□ 1.34
PDLIM7-204ENST00000393546 KIAA0825Q8IV33 1275 aa23.42■■□□□ 1.34
PDLIM7-204ENST00000393546 ZC3H15Q8WU90 426 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-204ENST00000393546 KIF4BQ2VIQ3 1234 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 MFSD14BQ5SR56 506 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 CCDC102BQ68D86 513 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 CERS5Q8N5B7 392 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 TBC1D22AQ8WUA7 517 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 MYOZ2Q9NPC6 264 aa23.41■■□□□ 1.34
PDLIM7-204ENST00000393546 PHKA1P46020 1223 aa23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 TNNI3KQ59H18 835 aa23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 FPGT-TNNI3KV9GXZ4 949 aa23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 ZNF646O15015 1829 aaPredicted RBP23.4■■□□□ 1.34
PDLIM7-204ENST00000393546 SEMA3EO15041 775 aa23.39■■□□□ 1.33
PDLIM7-204ENST00000393546 RAB11FIP3O75154 756 aa23.39■■□□□ 1.33
PDLIM7-204ENST00000393546 EGFRP00533 1210 aa23.39■■□□□ 1.33
PDLIM7-204ENST00000393546 PGAP2Q9UHJ9 254 aa23.39■■□□□ 1.33
PDLIM7-204ENST00000393546 ADAMTSL1Q8N6G6 1762 aa23.38■■□□□ 1.33
PDLIM7-204ENST00000393546 F8W031 263 aaPredicted RBP23.38■■□□□ 1.33
PDLIM7-204ENST00000393546 WDR66Q8TBY9 1149 aa23.38■■□□□ 1.33
PDLIM7-204ENST00000393546 DENND2AQ9ULE3 1009 aa23.38■■□□□ 1.33
PDLIM7-204ENST00000393546 ZBTB22O15209 634 aa23.37■■□□□ 1.33
PDLIM7-204ENST00000393546 AAMPQ13685 434 aa23.37■■□□□ 1.33
PDLIM7-204ENST00000393546 RHPN1Q8TCX5 695 aa23.37■■□□□ 1.33
PDLIM7-204ENST00000393546 APBB1O00213 710 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 ITGBL1O95965 494 aaPredicted RBP23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 HSPA6P17066 643 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 SCARF1Q14162 830 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 KIF1BPQ96EK5 621 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 PCDHB15Q9Y5E8 787 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 ARAP2Q8WZ64 1704 aa23.36■■□□□ 1.33
PDLIM7-204ENST00000393546 CCDC158Q5M9N0 1113 aa23.35■■□□□ 1.33
PDLIM7-204ENST00000393546 DCPSQ96C86 337 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-204ENST00000393546 TTF2Q9UNY4 1162 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-204ENST00000393546 SUGT1Q9Y2Z0 365 aa23.35■■□□□ 1.33
PDLIM7-204ENST00000393546 DLGAP5Q15398 846 aa23.34■■□□□ 1.33
PDLIM7-204ENST00000393546 EAF2Q96CJ1 260 aaPredicted RBP23.34■■□□□ 1.33
PDLIM7-204ENST00000393546 DBNDD2Q9BQY9 259 aa23.34■■□□□ 1.33
PDLIM7-204ENST00000393546 CCDC8Q9H0W5 538 aaPredicted RBP23.34■■□□□ 1.33
PDLIM7-204ENST00000393546 MYH13Q9UKX3 1938 aa23.33■■□□□ 1.33
PDLIM7-204ENST00000393546 UQCRFS1P1P0C7P4 283 aa23.33■■□□□ 1.33
PDLIM7-204ENST00000393546 CDC37L1Q7L3B6 337 aa23.33■■□□□ 1.33
PDLIM7-204ENST00000393546 CLASRPQ8N2M8 674 aaKnown RBP23.33■■□□□ 1.33
PDLIM7-204ENST00000393546 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
PDLIM7-204ENST00000393546 WNT10BO00744 389 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 RBM5P52756 815 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 RASGRF1Q13972 1273 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 NBPF9Q3BBW0 867 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 CFAP100Q494V2 611 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 TTC39AQ5SRH9 613 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 AACSQ86V21 672 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 MTMR14Q8NCE2 650 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 DCTPP1Q9H773 170 aa23.32■■□□□ 1.32
PDLIM7-204ENST00000393546 ARID4AP29374 1257 aaPredicted RBP23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 APLP1P51693 650 aa23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 GRIK5Q16478 980 aa23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 ZGPATQ8N5A5 531 aaKnown RBP23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 SERPINA10Q9UK55 444 aa23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 PDS5AQ29RF7 1337 aaKnown RBP23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 PASKQ96RG2 1323 aa23.31■■□□□ 1.32
PDLIM7-204ENST00000393546 HDLBPQ00341 1268 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 ANGEL2Q5VTE6 544 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 KRT26Q7Z3Y9 468 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 USP48Q86UV5 1035 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 ZBED3Q96IU2 234 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 MRIQ9BWK5 157 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 GLIS2Q9BZE0 524 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 DBNLQ9UJU6 430 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 POLR2AP24928 1970 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 MAST3O60307 1309 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 ASTN2O75129 1339 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 SALL1Q9NSC2 1324 aa23.3■■□□□ 1.32
PDLIM7-204ENST00000393546 LDHBP07195 334 aaKnown RBP23.29■■□□□ 1.32
PDLIM7-204ENST00000393546 SULF1Q8IWU6 871 aa23.29■■□□□ 1.32
PDLIM7-204ENST00000393546 SPATA5Q8NB90 893 aa23.29■■□□□ 1.32
PDLIM7-204ENST00000393546 LRRCC1Q9C099 1032 aa23.29■■□□□ 1.32
PDLIM7-204ENST00000393546 BCL11AQ9H165 835 aa23.29■■□□□ 1.32
PDLIM7-204ENST00000393546 HMG20BQ9P0W2 317 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms