RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 COL15A1P39059 1388 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 RTKN2Q8IZC4 609 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 H7C1D1 291 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC192P0DO97 292 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 CALML3P27482 149 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 C20orf194Q5TEA3 1177 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 MCTP2Q6DN12 878 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 STK11IPQ8N1F8 1099 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 MAGEB6Q8N7X4 407 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 TSPY26PQ9H489 355 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 PPEF1O14829 653 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 SDSP20132 328 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 ARHGEF1Q92888 912 aaKnown RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 RRP36Q96EU6 259 aaKnown RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
ATXN3-203ENST00000393287 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
ATXN3-203ENST00000393287 RGS12O14924 1447 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 PCP11498 1178 aaKnown RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 XAGE2Q96GT9 111 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 CNTNAP4Q9C0A0 1308 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 PLSCR1O15162 318 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 CALML4Q96GE6 196 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 C6orf50Q9HD87 102 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 NBPF7P0C2Y1 421 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 NPR1P16066 1061 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 DALRD3Q5D0E6 543 aaKnown RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 BEND3Q5T5X7 828 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 PIM2Q9P1W9 311 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 A0A1B0GUL7 405 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 ARHGAP27Q6ZUM4 889 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 TTLL6Q8N841 843 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 OFD1O75665 1012 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 DCAF15Q66K64 600 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 TEX11Q8IYF3 940 aa9.38□□□□□ -0.91
ATXN3-203ENST00000393287 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-203ENST00000393287 ZBTB43O43298 467 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 PPIP5K2O43314 1243 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 PRKCSHP14314 528 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 ODF2Q5BJF6 829 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 RTN1Q16799 776 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 CT47A1Q5JQC4 288 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 ZNHIT6Q9NWK9 470 aaKnown RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 PROSER3Q2NL68 480 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 SPATA5Q8NB90 893 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 SUCLG2Q96I99 432 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 PABPC4Q13310 644 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 APPBP2Q92624 585 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 TNMDQ9H2S6 317 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 IBTKQ9P2D0 1353 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 POTEJP0CG39 1038 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 TNPO1Q92973 898 aaKnown RBP9.37□□□□□ -0.91
ATXN3-203ENST00000393287 TCP11L1Q9NUJ3 509 aa9.37□□□□□ -0.91
ATXN3-203ENST00000393287 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 NMIQ13287 307 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 NLRP10Q86W26 655 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC150Q8NCX0 1101 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 ATP2B1P20020 1258 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 APBB1IPQ7Z5R6 666 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 MCM9Q9NXL9 1143 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 PICALMQ13492 652 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 ARHGEF6Q15052 776 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 BRIP1Q9BX63 1249 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 NRKQ7Z2Y5 1582 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 GNA11P29992 359 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 PA2G4Q9UQ80 394 aaKnown RBP9.36□□□□□ -0.91
ATXN3-203ENST00000393287 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
ATXN3-203ENST00000393287 MYO3BQ8WXR4 1341 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 POTEAQ6S8J7 498 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 ZNF521Q96K83 1311 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 ATP5JP18859 108 aa9.35□□□□□ -0.91
ATXN3-203ENST00000393287 CCDC173Q0VFZ6 552 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms