RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 RPGRQ92834 1020 aaKnown RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 GPAA1O43292 621 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 RBM17Q96I25 401 aaKnown RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 DENND2AQ9ULE3 1009 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 LEMD3Q9Y2U8 911 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 PDS5AQ29RF7 1337 aaKnown RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 CPA1P15085 419 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 GYG1P46976 350 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 SH2B1Q9NRF2 756 aaPredicted RBP11.56□□□□□ -0.56
SYT1-202ENST00000393240 TAF6LQ9Y6J9 622 aa11.56□□□□□ -0.56
SYT1-202ENST00000393240 VPS37DQ86XT2 251 aa11.55□□□□□ -0.56
SYT1-202ENST00000393240 WWC3Q9ULE0 1092 aa11.55□□□□□ -0.56
SYT1-202ENST00000393240 RGPD3A6NKT7 1758 aaPredicted RBP11.55□□□□□ -0.56
SYT1-202ENST00000393240 RGPD4Q7Z3J3 1758 aa11.55□□□□□ -0.56
SYT1-202ENST00000393240 FOXP2O15409 715 aa11.55□□□□□ -0.56
SYT1-202ENST00000393240 BBOX1O75936 387 aa11.55□□□□□ -0.56
SYT1-202ENST00000393240 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 A0A1B0GUL6 1792 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 FGAP02671 866 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 HIBADHP31937 336 aaKnown RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 IMMTQ16891 758 aaKnown RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 IGSF3O75054 1194 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 C15orf52Q6ZUT6 534 aaKnown RBP11.54□□□□□ -0.56
SYT1-202ENST00000393240 MAGEB6Q8N7X4 407 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
SYT1-202ENST00000393240 XDHP47989 1333 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 TNS1Q9HBL0 1735 aaKnown RBP11.53□□□□□ -0.56
SYT1-202ENST00000393240 E7EWF7 191 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 MCM4P33991 863 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 TMED8Q6PL24 325 aaPredicted RBP11.53□□□□□ -0.56
SYT1-202ENST00000393240 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
SYT1-202ENST00000393240 ALX1Q15699 326 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 DHX32Q7L7V1 743 aaKnown RBP11.53□□□□□ -0.56
SYT1-202ENST00000393240 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 ZMYM6O95789 1325 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 PNPLA7Q6ZV29 1317 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 TAF1P21675 1872 aa11.53□□□□□ -0.56
SYT1-202ENST00000393240 GNAT2P19087 354 aa11.52□□□□□ -0.56
SYT1-202ENST00000393240 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.56
SYT1-202ENST00000393240 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
SYT1-202ENST00000393240 EXOSC10Q01780 885 aaKnown RBP11.52□□□□□ -0.57
SYT1-202ENST00000393240 FBXL16Q8N461 479 aa11.52□□□□□ -0.57
SYT1-202ENST00000393240 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
SYT1-202ENST00000393240 DOCK2Q92608 1830 aa11.52□□□□□ -0.57
SYT1-202ENST00000393240 ZNF213O14771 459 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 COL9A3Q14050 684 aaPredicted RBP11.51□□□□□ -0.57
SYT1-202ENST00000393240 ME3Q16798 604 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 PODXL2Q9NZ53 605 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
SYT1-202ENST00000393240 MYH7P12883 1935 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 ATP2B4P23634 1241 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 KLRK1P26718 216 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 PARP3Q9Y6F1 533 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 ABCF2Q9UG63 623 aa11.51□□□□□ -0.57
SYT1-202ENST00000393240 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
SYT1-202ENST00000393240 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 PTMSP20962 102 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 PDE6BP35913 854 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 SLC15A2Q16348 729 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
SYT1-202ENST00000393240 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 A0A0G2JLW4 131 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 MBD4O95243 580 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 LARGE1O95461 756 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
SYT1-202ENST00000393240 GPSM2P81274 684 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 Q6ZUG5 572 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 RAI14Q9P0K7 980 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
SYT1-202ENST00000393240 BRD1O95696 1058 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 APPP05067 770 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 MMP10P09238 476 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 NPR1P16066 1061 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 CYP7A1P22680 504 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
SYT1-202ENST00000393240 ZNF804AQ7Z570 1209 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 TXNRD3Q86VQ6 643 aa11.49□□□□□ -0.57
SYT1-202ENST00000393240 SMC3Q9UQE7 1217 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms