RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
PDGFD-202ENST00000393158 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
PDGFD-202ENST00000393158 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
PDGFD-202ENST00000393158 XDHP47989 1333 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 CCDC129Q6ZRS4 1044 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 IL1R1P14778 569 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 PRELPP51888 382 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
PDGFD-202ENST00000393158 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
PDGFD-202ENST00000393158 HSPA4P34932 840 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
PDGFD-202ENST00000393158 ADD2P35612 726 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 PDE6BP35913 854 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
PDGFD-202ENST00000393158 MYH1P12882 1939 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 SLC5A1P13866 664 aa13.11□□□□□ -0.31
PDGFD-202ENST00000393158 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
PDGFD-202ENST00000393158 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
PDGFD-202ENST00000393158 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
PDGFD-202ENST00000393158 SALL1Q9NSC2 1324 aa13.1□□□□□ -0.31
PDGFD-202ENST00000393158 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
PDGFD-202ENST00000393158 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
PDGFD-202ENST00000393158 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
PDGFD-202ENST00000393158 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
PDGFD-202ENST00000393158 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
PDGFD-202ENST00000393158 C2CD5Q86YS7 1000 aa13.09□□□□□ -0.31
PDGFD-202ENST00000393158 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
PDGFD-202ENST00000393158 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
PDGFD-202ENST00000393158 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
PDGFD-202ENST00000393158 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
PDGFD-202ENST00000393158 DPEP1P16444 411 aa13.08□□□□□ -0.32
PDGFD-202ENST00000393158 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDGFD-202ENST00000393158 ADCK5Q3MIX3 580 aa13.08□□□□□ -0.32
PDGFD-202ENST00000393158 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
PDGFD-202ENST00000393158 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
PDGFD-202ENST00000393158 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
PDGFD-202ENST00000393158 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
PDGFD-202ENST00000393158 FSD1Q9BTV5 496 aa13.07□□□□□ -0.32
PDGFD-202ENST00000393158 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
PDGFD-202ENST00000393158 PDE6AP16499 860 aa13.07□□□□□ -0.32
PDGFD-202ENST00000393158 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
PDGFD-202ENST00000393158 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
PDGFD-202ENST00000393158 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 DDIT3P35638 169 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
PDGFD-202ENST00000393158 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 PRDX5P30044 214 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 EVX2Q03828 476 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 HSPD1P10809 573 aaKnown RBP13.06□□□□□ -0.32
PDGFD-202ENST00000393158 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 TTC14Q96N46 770 aa13.06□□□□□ -0.32
PDGFD-202ENST00000393158 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 NLGN2Q8NFZ4 835 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
PDGFD-202ENST00000393158 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
PDGFD-202ENST00000393158 UFL1O94874 794 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
PDGFD-202ENST00000393158 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 MYH8P13535 1937 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 SEMA3EO15041 775 aa13.05□□□□□ -0.32
PDGFD-202ENST00000393158 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 DENND2AQ9ULE3 1009 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 H0YIN7 160 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 CYP21A2P08686 494 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
PDGFD-202ENST00000393158 ANKIB1Q9P2G1 1089 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 PAPPA2Q9BXP8 1791 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 APPBP2Q92624 585 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
PDGFD-202ENST00000393158 MECOMQ03112 1051 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 SLC9C2Q5TAH2 1124 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 SLC27A2O14975 620 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 TGFB2P61812 414 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 ST3GAL1Q11201 340 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
PDGFD-202ENST00000393158 RBM8AQ9Y5S9 174 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms