RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 R3HDM1Q15032 1099 aaKnown RBP23.63■■□□□ 1.37
CSNK1D-203ENST00000392334 LPIN2Q92539 896 aa23.63■■□□□ 1.37
CSNK1D-203ENST00000392334 PTH1RQ03431 593 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 TTC14Q96N46 770 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 LSG1Q9H089 658 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 NRXN2Q9P2S2 1712 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 FGFR2P21802 821 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 PHKA1P46020 1223 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 GLIPR1L2Q4G1C9 344 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 KLHL34Q8N239 644 aa23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 SEC62Q99442 399 aaKnown RBP23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 RPAP1Q9BWH6 1393 aaPredicted RBP23.62■■□□□ 1.37
CSNK1D-203ENST00000392334 HIP1O00291 1037 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 ZAP70P43403 619 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 CCDC102BQ68D86 513 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 KBTBD3Q8NAB2 608 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 LRP5O75197 1615 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 SRCAPQ6ZRS2 3230 aa23.61■■□□□ 1.37
CSNK1D-203ENST00000392334 MCAMP43121 646 aa23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 ZNF589Q86UQ0 364 aaPredicted RBP23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 SLC51AQ86UW1 340 aa23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 SNX14Q9Y5W7 946 aa23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 ANKRD31Q8N7Z5 1873 aa23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 RPS8P62241 208 aaKnown RBP23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 NOL8Q76FK4 1167 aaKnown RBP23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 BSDC1Q9NW68 430 aaPredicted RBP23.6■■□□□ 1.37
CSNK1D-203ENST00000392334 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 SLC5A1P13866 664 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 CSPP1Q1MSJ5 1256 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 CCDC129Q6ZRS4 1044 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 MINPP1Q9UNW1 487 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 PSDA5PKW4 1024 aaPredicted RBP23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 USP48Q86UV5 1035 aa23.59■■□□□ 1.37
CSNK1D-203ENST00000392334 UVSSAQ2YD98 709 aa23.58■■□□□ 1.37
CSNK1D-203ENST00000392334 FAM184AQ8NB25 1140 aa23.58■■□□□ 1.37
CSNK1D-203ENST00000392334 BCAMP50895 628 aa23.57■■□□□ 1.36
CSNK1D-203ENST00000392334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.57■■□□□ 1.36
CSNK1D-203ENST00000392334 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
CSNK1D-203ENST00000392334 SLC16A10Q8TF71 515 aa23.56■■□□□ 1.36
CSNK1D-203ENST00000392334 BRIP1Q9BX63 1249 aa23.56■■□□□ 1.36
CSNK1D-203ENST00000392334 GADD45BO75293 160 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 LIMCH1Q9UPQ0 1083 aa23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 LETM1O95202 739 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 ZSCAN22P10073 491 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 RPGRQ92834 1020 aaKnown RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 IQSEC3Q9UPP2 1182 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 ATF5Q9Y2D1 282 aaPredicted RBP23.55■■□□□ 1.36
CSNK1D-203ENST00000392334 CCDC171Q6TFL3 1326 aa23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 RASEFQ8IZ41 740 aa23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 KLRG2A4D1S0 409 aaPredicted RBP23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 KCNJ4P48050 445 aa23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 AK2P54819 239 aa23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 CCDC183Q5T5S1 534 aa23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
CSNK1D-203ENST00000392334 GYG1P46976 350 aa23.53■■□□□ 1.36
CSNK1D-203ENST00000392334 MCMDC2Q4G0Z9 681 aa23.53■■□□□ 1.36
CSNK1D-203ENST00000392334 RNF214Q8ND24 703 aa23.53■■□□□ 1.36
CSNK1D-203ENST00000392334 KCNB2Q92953 911 aa23.53■■□□□ 1.36
CSNK1D-203ENST00000392334 TCHHQ07283 1943 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 ARID4AP29374 1257 aaPredicted RBP23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 RUFY3Q7L099 469 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 HMG20BQ9P0W2 317 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 MED23Q9ULK4 1368 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 RNF113AO15541 343 aaKnown RBP23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 RASGRF1Q13972 1273 aa23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 RBM8AQ9Y5S9 174 aaKnown RBP23.52■■□□□ 1.36
CSNK1D-203ENST00000392334 STX6O43752 255 aa23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 KLRK1P26718 216 aa23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 TM6SF1Q9BZW5 370 aa23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 GDPD2Q9HCC8 539 aa23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 PIH1D3Q9NQM4 214 aaKnown RBP23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 ATP6V1DQ9Y5K8 247 aa23.51■■□□□ 1.35
CSNK1D-203ENST00000392334 UQCRFS1P1P0C7P4 283 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 SRGNP10124 158 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 UBE2HP62256 183 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 GRAPQ13588 217 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 WASHC4Q2M389 1173 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 MAP4K1Q92918 833 aa23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 ZNF512BQ96KM6 892 aaPredicted RBP23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 COL11A2P13942 1736 aaPredicted RBP23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 IDH1O75874 414 aaKnown RBP23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 R3HCC1Q9Y3T6 440 aaKnown RBP23.5■■□□□ 1.35
CSNK1D-203ENST00000392334 F13A1P00488 732 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 SYT1P21579 422 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 PDE6BP35913 854 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 ZMYM1Q5SVZ6 1142 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 OSBP2Q969R2 916 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 RFX7Q2KHR2 1363 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 VPS53Q5VIR6 699 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 ZSCAN31Q96LW9 406 aaPredicted RBP23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 MTFR1LQ9H019 292 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 SMC3Q9UQE7 1217 aa23.49■■□□□ 1.35
CSNK1D-203ENST00000392334 M0R2C6 588 aa23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 HOXA10P31260 410 aaPredicted RBP23.48■■□□□ 1.35
CSNK1D-203ENST00000392334 UBE4AQ14139 1066 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms